Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HOXA11P31270 KRT18P22-201ENST00000402024 1347 ntBASIC21.15■□□□□ 0.98
HOXA11P31270 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HOXA11P31270 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA11P31270 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA11P31270 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.15■□□□□ 0.98
HOXA11P31270 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA11P31270 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.15■□□□□ 0.98
HOXA11P31270 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA11P31270 SLC25A1P4-201ENST00000567977 778 ntBASIC21.15■□□□□ 0.98
HOXA11P31270 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.15■□□□□ 0.98
HOXA11P31270 AC005363.2-201ENST00000618631 242 ntBASIC21.15■□□□□ 0.98
HOXA11P31270 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA11P31270 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.15■□□□□ 0.98
HOXA11P31270 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA11P31270 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA11P31270 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.14■□□□□ 0.98
HOXA11P31270 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOXA11P31270 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
HOXA11P31270 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HOXA11P31270 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HOXA11P31270 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 TSPY14P-201ENST00000303979 915 ntBASIC21.14■□□□□ 0.97
HOXA11P31270 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 MIR1224-201ENST00000408193 85 ntBASIC21.14■□□□□ 0.97
HOXA11P31270 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.14■□□□□ 0.97
HOXA11P31270 FAM207BP-201ENST00000447172 505 ntBASIC21.14■□□□□ 0.97
HOXA11P31270 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
HOXA11P31270 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA11P31270 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HOXA11P31270 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HOXA11P31270 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HOXA11P31270 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HOXA11P31270 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA11P31270 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA11P31270 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.14■□□□□ 0.97
HOXA11P31270 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.14■□□□□ 0.97
HOXA11P31270 KRT8P41-201ENST00000533985 1514 ntBASIC21.14■□□□□ 0.97
HOXA11P31270 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXA11P31270 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HOXA11P31270 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA11P31270 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA11P31270 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
HOXA11P31270 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HOXA11P31270 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA11P31270 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA11P31270 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HOXA11P31270 RN7SL850P-201ENST00000579959 291 ntBASIC21.13■□□□□ 0.97
HOXA11P31270 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.13■□□□□ 0.97
HOXA11P31270 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA11P31270 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 INGX-201ENST00000359239 846 ntBASIC21.12■□□□□ 0.97
HOXA11P31270 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 AC005521.1-201ENST00000393351 872 ntBASIC21.12■□□□□ 0.97
HOXA11P31270 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.12■□□□□ 0.97
HOXA11P31270 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.12■□□□□ 0.97
HOXA11P31270 EGLN1P1-201ENST00000531623 762 ntBASIC21.12■□□□□ 0.97
HOXA11P31270 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.12■□□□□ 0.97
HOXA11P31270 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HOXA11P31270 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 AC073508.3-201ENST00000619697 1419 ntBASIC21.12■□□□□ 0.97
HOXA11P31270 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 LINC01521-201ENST00000504184 1943 ntBASIC21.12■□□□□ 0.97
HOXA11P31270 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA11P31270 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA11P31270 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA11P31270 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA11P31270 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HOXA11P31270 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA11P31270 AC113347.1-201ENST00000413321 391 ntBASIC21.11■□□□□ 0.97
HOXA11P31270 MFAP1P1-201ENST00000442257 1255 ntBASIC21.11■□□□□ 0.97
HOXA11P31270 C2orf69P3-201ENST00000565542 1120 ntBASIC21.11■□□□□ 0.97
HOXA11P31270 AC010331.1-201ENST00000611423 582 ntBASIC21.11■□□□□ 0.97
HOXA11P31270 AC092865.7-201ENST00000641832 219 ntBASIC21.11■□□□□ 0.97
HOXA11P31270 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA11P31270 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA11P31270 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA11P31270 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms