Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN3P26045 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PTPN3P26045 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PTPN3P26045 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
PTPN3P26045 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.89■□□□□ 0.77
PTPN3P26045 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN3P26045 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN3P26045 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN3P26045 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN3P26045 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN3P26045 KRT18P16-201ENST00000510337 1294 ntBASIC19.89■□□□□ 0.77
PTPN3P26045 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN3P26045 AC233263.1-201ENST00000578059 224 ntBASIC19.89■□□□□ 0.77
PTPN3P26045 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.89■□□□□ 0.77
PTPN3P26045 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PTPN3P26045 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN3P26045 AL032819.2-201ENST00000624543 2162 ntBASIC19.88■□□□□ 0.77
PTPN3P26045 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN3P26045 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN3P26045 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN3P26045 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN3P26045 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN3P26045 AC069544.1-201ENST00000609399 999 ntBASIC19.88■□□□□ 0.77
PTPN3P26045 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN3P26045 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN3P26045 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN3P26045 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN3P26045 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PTPN3P26045 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN3P26045 KRT8P8-201ENST00000434750 1448 ntBASIC19.87■□□□□ 0.77
PTPN3P26045 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN3P26045 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN3P26045 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN3P26045 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN3P26045 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
PTPN3P26045 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PTPN3P26045 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN3P26045 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN3P26045 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN3P26045 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN3P26045 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PTPN3P26045 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN3P26045 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PTPN3P26045 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 ZNF815P-204ENST00000434898 1737 ntBASIC19.86■□□□□ 0.77
PTPN3P26045 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN3P26045 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 ESRRAP1-201ENST00000400596 1257 ntBASIC19.86■□□□□ 0.77
PTPN3P26045 KRT17P3-201ENST00000420566 1262 ntBASIC19.86■□□□□ 0.77
PTPN3P26045 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.86■□□□□ 0.77
PTPN3P26045 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN3P26045 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PTPN3P26045 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN3P26045 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.86■□□□□ 0.77
PTPN3P26045 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN3P26045 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms