Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
BRD2P25440 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.91■□□□□ 0.94
BRD2P25440 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.91■□□□□ 0.94
BRD2P25440 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRD2P25440 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.9■□□□□ 0.94
BRD2P25440 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.9■□□□□ 0.94
BRD2P25440 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
BRD2P25440 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.9■□□□□ 0.94
BRD2P25440 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.9■□□□□ 0.94
BRD2P25440 AC073648.6-201ENST00000641589 218 ntBASIC20.9■□□□□ 0.94
BRD2P25440 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRD2P25440 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRD2P25440 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.89■□□□□ 0.93
BRD2P25440 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
BRD2P25440 MTDHP1-201ENST00000605323 784 ntBASIC20.89■□□□□ 0.93
BRD2P25440 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRD2P25440 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BRD2P25440 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRD2P25440 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
BRD2P25440 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRD2P25440 AC104581.1-202ENST00000635932 2618 ntBASIC20.89■□□□□ 0.93
BRD2P25440 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
BRD2P25440 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
BRD2P25440 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
BRD2P25440 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
BRD2P25440 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.88■□□□□ 0.93
BRD2P25440 AC128676.1-201ENST00000454392 318 ntBASIC20.88■□□□□ 0.93
BRD2P25440 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.88■□□□□ 0.93
BRD2P25440 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
BRD2P25440 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.88■□□□□ 0.93
BRD2P25440 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRD2P25440 AP006587.1-201ENST00000534129 1502 ntBASIC20.88■□□□□ 0.93
BRD2P25440 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
BRD2P25440 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
BRD2P25440 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
BRD2P25440 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRD2P25440 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.87■□□□□ 0.93
BRD2P25440 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.87■□□□□ 0.93
BRD2P25440 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.87■□□□□ 0.93
BRD2P25440 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
BRD2P25440 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.87■□□□□ 0.93
BRD2P25440 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
BRD2P25440 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRD2P25440 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD2P25440 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRD2P25440 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRD2P25440 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms