Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
APCP25054 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.48■□□□□ 0.23
APCP25054 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.48■□□□□ 0.23
APCP25054 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
APCP25054 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 IL9RP2-201ENST00000423948 1312 ntBASIC16.48■□□□□ 0.23
APCP25054 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
APCP25054 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.48■□□□□ 0.23
APCP25054 KRT8P8-201ENST00000434750 1448 ntBASIC16.48■□□□□ 0.23
APCP25054 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.48■□□□□ 0.23
APCP25054 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.48■□□□□ 0.23
APCP25054 NUS1P1-201ENST00000446295 882 ntBASIC16.48■□□□□ 0.23
APCP25054 AC079776.4-201ENST00000511039 504 ntBASIC16.48■□□□□ 0.23
APCP25054 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.48■□□□□ 0.23
APCP25054 AL162741.1-201ENST00000565563 1558 ntBASIC16.48■□□□□ 0.23
APCP25054 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
APCP25054 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.48■□□□□ 0.23
APCP25054 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
APCP25054 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
APCP25054 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.47■□□□□ 0.23
APCP25054 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.47■□□□□ 0.23
APCP25054 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.47■□□□□ 0.23
APCP25054 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
APCP25054 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.47■□□□□ 0.23
APCP25054 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
APCP25054 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.47■□□□□ 0.23
APCP25054 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.47■□□□□ 0.23
APCP25054 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.47■□□□□ 0.23
APCP25054 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APCP25054 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
APCP25054 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.47■□□□□ 0.23
APCP25054 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
APCP25054 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.47■□□□□ 0.23
APCP25054 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APCP25054 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APCP25054 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
APCP25054 SLC25A1P1-201ENST00000528351 927 ntBASIC16.46■□□□□ 0.23
APCP25054 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
APCP25054 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
APCP25054 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.46■□□□□ 0.23
APCP25054 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 ECEL1P1-201ENST00000373592 1742 ntBASIC16.46■□□□□ 0.23
APCP25054 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.46■□□□□ 0.23
APCP25054 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.46■□□□□ 0.23
APCP25054 AC091304.2-201ENST00000564639 760 ntBASIC16.46■□□□□ 0.23
APCP25054 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.46■□□□□ 0.23
APCP25054 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
APCP25054 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.46■□□□□ 0.23
APCP25054 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
APCP25054 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.46■□□□□ 0.22
APCP25054 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
APCP25054 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.46■□□□□ 0.22
APCP25054 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
APCP25054 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
APCP25054 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
APCP25054 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.46■□□□□ 0.22
APCP25054 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.46■□□□□ 0.22
APCP25054 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
APCP25054 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.45■□□□□ 0.22
APCP25054 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.45■□□□□ 0.22
APCP25054 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.45■□□□□ 0.22
APCP25054 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 FAM220CP-201ENST00000395253 831 ntBASIC16.45■□□□□ 0.22
APCP25054 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.45■□□□□ 0.22
APCP25054 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.45■□□□□ 0.22
APCP25054 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
APCP25054 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
APCP25054 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.44■□□□□ 0.22
APCP25054 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
APCP25054 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.44■□□□□ 0.22
APCP25054 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.44■□□□□ 0.22
APCP25054 TSSC2-201ENST00000450217 709 ntBASIC16.44■□□□□ 0.22
APCP25054 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.44■□□□□ 0.22
APCP25054 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.44■□□□□ 0.22
APCP25054 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
APCP25054 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms