Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 CROCCP3-202ENST00000420820 1947 ntBASIC18.75■□□□□ 0.59
CAPN3P20807 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CAPN3P20807 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 HLA-G-202ENST00000376815 851 ntBASIC18.75■□□□□ 0.59
CAPN3P20807 HLA-G-203ENST00000376818 1127 ntBASIC18.75■□□□□ 0.59
CAPN3P20807 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 KRT18P68-201ENST00000392293 1000 ntBASIC18.75■□□□□ 0.59
CAPN3P20807 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.75■□□□□ 0.59
CAPN3P20807 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.75■□□□□ 0.59
CAPN3P20807 AC133552.2-202ENST00000575694 574 ntBASIC18.75■□□□□ 0.59
CAPN3P20807 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CAPN3P20807 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.75■□□□□ 0.59
CAPN3P20807 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CAPN3P20807 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CAPN3P20807 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.75■□□□□ 0.59
CAPN3P20807 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.74■□□□□ 0.59
CAPN3P20807 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.74■□□□□ 0.59
CAPN3P20807 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CAPN3P20807 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.74■□□□□ 0.59
CAPN3P20807 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.74■□□□□ 0.59
CAPN3P20807 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.74■□□□□ 0.59
CAPN3P20807 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CAPN3P20807 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.74■□□□□ 0.59
CAPN3P20807 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CAPN3P20807 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CAPN3P20807 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CAPN3P20807 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CAPN3P20807 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.73■□□□□ 0.59
CAPN3P20807 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAPN3P20807 CNN2P6-201ENST00000439038 900 ntBASIC18.73■□□□□ 0.59
CAPN3P20807 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CAPN3P20807 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.73■□□□□ 0.59
CAPN3P20807 MIR4758-201ENST00000577688 71 ntBASIC18.73■□□□□ 0.59
CAPN3P20807 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CAPN3P20807 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 AC068338.2-201ENST00000563278 1430 ntBASIC18.73■□□□□ 0.59
CAPN3P20807 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN3P20807 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 AL161938.1-201ENST00000569833 2180 ntBASIC18.72■□□□□ 0.59
CAPN3P20807 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN3P20807 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
CAPN3P20807 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN3P20807 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.72■□□□□ 0.59
CAPN3P20807 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN3P20807 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.72■□□□□ 0.59
CAPN3P20807 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CAPN3P20807 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN3P20807 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms