Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 POU5F1P3-201ENST00000428824 1078 ntBASIC19.69■□□□□ 0.74
HLA-DPA1P20036 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 AC233263.1-201ENST00000578059 224 ntBASIC19.69■□□□□ 0.74
HLA-DPA1P20036 MIR4651-201ENST00000582622 73 ntBASIC19.69■□□□□ 0.74
HLA-DPA1P20036 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.69■□□□□ 0.74
HLA-DPA1P20036 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DPA1P20036 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 TSPY20P-201ENST00000450910 630 ntBASIC19.68■□□□□ 0.74
HLA-DPA1P20036 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 AC006058.3-201ENST00000606217 1069 ntBASIC19.68■□□□□ 0.74
HLA-DPA1P20036 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DPA1P20036 KRT8P8-201ENST00000434750 1448 ntBASIC19.68■□□□□ 0.74
HLA-DPA1P20036 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 TUBB8P6-201ENST00000436895 1288 ntBASIC19.67■□□□□ 0.74
HLA-DPA1P20036 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPA1P20036 NBPF21P-201ENST00000425093 1451 ntBASIC19.67■□□□□ 0.74
HLA-DPA1P20036 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 ABHD17AP1-201ENST00000358206 933 ntBASIC19.66■□□□□ 0.74
HLA-DPA1P20036 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 AC073648.6-201ENST00000641589 218 ntBASIC19.66■□□□□ 0.74
HLA-DPA1P20036 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPA1P20036 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DPA1P20036 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms