Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NFKB1P19838 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.85■□□□□ 0.77
NFKB1P19838 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
NFKB1P19838 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.85■□□□□ 0.77
NFKB1P19838 AC233263.1-201ENST00000578059 224 ntBASIC19.85■□□□□ 0.77
NFKB1P19838 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.85■□□□□ 0.77
NFKB1P19838 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.85■□□□□ 0.77
NFKB1P19838 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
NFKB1P19838 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NFKB1P19838 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NFKB1P19838 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.84■□□□□ 0.77
NFKB1P19838 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.84■□□□□ 0.77
NFKB1P19838 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.84■□□□□ 0.77
NFKB1P19838 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.84■□□□□ 0.77
NFKB1P19838 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.84■□□□□ 0.77
NFKB1P19838 AC069544.1-201ENST00000609399 999 ntBASIC19.84■□□□□ 0.77
NFKB1P19838 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NFKB1P19838 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NFKB1P19838 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
NFKB1P19838 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.83■□□□□ 0.77
NFKB1P19838 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
NFKB1P19838 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.83■□□□□ 0.77
NFKB1P19838 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NFKB1P19838 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.83■□□□□ 0.77
NFKB1P19838 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.83■□□□□ 0.77
NFKB1P19838 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.83■□□□□ 0.77
NFKB1P19838 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.83■□□□□ 0.77
NFKB1P19838 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.83■□□□□ 0.77
NFKB1P19838 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NFKB1P19838 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NFKB1P19838 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NFKB1P19838 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NFKB1P19838 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.82■□□□□ 0.76
NFKB1P19838 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.82■□□□□ 0.76
NFKB1P19838 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NFKB1P19838 ESRRAP1-201ENST00000400596 1257 ntBASIC19.82■□□□□ 0.76
NFKB1P19838 KRT17P3-201ENST00000420566 1262 ntBASIC19.82■□□□□ 0.76
NFKB1P19838 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.82■□□□□ 0.76
NFKB1P19838 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.82■□□□□ 0.76
NFKB1P19838 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.82■□□□□ 0.76
NFKB1P19838 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.82■□□□□ 0.76
NFKB1P19838 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NFKB1P19838 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NFKB1P19838 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NFKB1P19838 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
NFKB1P19838 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NFKB1P19838 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.81■□□□□ 0.76
NFKB1P19838 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 KRT18P16-201ENST00000510337 1294 ntBASIC19.81■□□□□ 0.76
NFKB1P19838 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.81■□□□□ 0.76
NFKB1P19838 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 PRKY-204ENST00000533551 1019 ntBASIC19.81■□□□□ 0.76
NFKB1P19838 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 AL032819.2-201ENST00000624543 2162 ntBASIC19.81■□□□□ 0.76
NFKB1P19838 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NFKB1P19838 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
NFKB1P19838 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms