Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
COL11A2P13942 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL11A2P13942 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL11A2P13942 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24■■□□□ 1.43
COL11A2P13942 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COL11A2P13942 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC24■■□□□ 1.43
COL11A2P13942 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL11A2P13942 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
COL11A2P13942 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
COL11A2P13942 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL11A2P13942 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC24■■□□□ 1.43
COL11A2P13942 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
COL11A2P13942 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
COL11A2P13942 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.99■■□□□ 1.43
COL11A2P13942 AP001271.2-201ENST00000624018 1556 ntBASIC23.99■■□□□ 1.43
COL11A2P13942 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL11A2P13942 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
COL11A2P13942 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL11A2P13942 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.99■■□□□ 1.43
COL11A2P13942 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL11A2P13942 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.99■■□□□ 1.43
COL11A2P13942 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
COL11A2P13942 EP400NL-214ENST00000641289 2402 ntBASIC23.99■■□□□ 1.43
COL11A2P13942 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.98■■□□□ 1.43
COL11A2P13942 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.98■■□□□ 1.43
COL11A2P13942 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.98■■□□□ 1.43
COL11A2P13942 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
COL11A2P13942 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.98■■□□□ 1.43
COL11A2P13942 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
COL11A2P13942 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL11A2P13942 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.97■■□□□ 1.43
COL11A2P13942 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.97■■□□□ 1.43
COL11A2P13942 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.97■■□□□ 1.43
COL11A2P13942 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 HBZP1-201ENST00000354915 429 ntBASIC23.97■■□□□ 1.43
COL11A2P13942 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
COL11A2P13942 GCSHP2-201ENST00000560971 527 ntBASIC23.97■■□□□ 1.43
COL11A2P13942 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
COL11A2P13942 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 KRT8P11-201ENST00000409686 1436 ntBASIC23.97■■□□□ 1.43
COL11A2P13942 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL11A2P13942 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
COL11A2P13942 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.96■■□□□ 1.43
COL11A2P13942 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.96■■□□□ 1.43
COL11A2P13942 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.96■■□□□ 1.43
COL11A2P13942 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
COL11A2P13942 LINC01311-201ENST00000565162 1445 ntBASIC23.96■■□□□ 1.43
COL11A2P13942 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
COL11A2P13942 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.96■■□□□ 1.43
COL11A2P13942 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.96■■□□□ 1.43
COL11A2P13942 AL645929.1-201ENST00000420084 975 ntBASIC23.96■■□□□ 1.43
COL11A2P13942 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL11A2P13942 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
COL11A2P13942 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL11A2P13942 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL11A2P13942 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL11A2P13942 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL11A2P13942 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
COL11A2P13942 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.95■■□□□ 1.42
COL11A2P13942 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL11A2P13942 PVRIG2P-201ENST00000435460 978 ntBASIC23.95■■□□□ 1.42
COL11A2P13942 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.95■■□□□ 1.42
COL11A2P13942 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.95■■□□□ 1.42
COL11A2P13942 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.95■■□□□ 1.42
COL11A2P13942 MIR4674-201ENST00000582457 87 ntBASIC23.95■■□□□ 1.42
COL11A2P13942 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL11A2P13942 AL031432.5-201ENST00000641059 760 ntBASIC23.95■■□□□ 1.42
COL11A2P13942 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.95■■□□□ 1.42
COL11A2P13942 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL11A2P13942 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL11A2P13942 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL11A2P13942 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL11A2P13942 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL11A2P13942 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.94■■□□□ 1.42
COL11A2P13942 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.94■■□□□ 1.42
COL11A2P13942 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.94■■□□□ 1.42
COL11A2P13942 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL11A2P13942 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms