Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRNB1P11230 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNB1P11230 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNB1P11230 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHRNB1P11230 AF106564.1-201ENST00000607058 2553 ntBASIC19.82■□□□□ 0.76
CHRNB1P11230 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNB1P11230 AL137060.1-201ENST00000618151 2648 ntBASIC19.81■□□□□ 0.76
CHRNB1P11230 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNB1P11230 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNB1P11230 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNB1P11230 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNB1P11230 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNB1P11230 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CHRNB1P11230 Z85996.1-201ENST00000494644 937 ntBASIC19.81■□□□□ 0.76
CHRNB1P11230 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNB1P11230 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNB1P11230 AL121894.2-201ENST00000602977 491 ntBASIC19.81■□□□□ 0.76
CHRNB1P11230 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNB1P11230 AL121956.5-201ENST00000625261 221 ntBASIC19.81■□□□□ 0.76
CHRNB1P11230 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CHRNB1P11230 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNB1P11230 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNB1P11230 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.8■□□□□ 0.76
CHRNB1P11230 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.8■□□□□ 0.76
CHRNB1P11230 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHRNB1P11230 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 PCED1CP-201ENST00000419887 785 ntBASIC19.8■□□□□ 0.76
CHRNB1P11230 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNB1P11230 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNB1P11230 TSPY17P-201ENST00000450329 467 ntBASIC19.8■□□□□ 0.76
CHRNB1P11230 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
CHRNB1P11230 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNB1P11230 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHRNB1P11230 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHRNB1P11230 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNB1P11230 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNB1P11230 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHRNB1P11230 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHRNB1P11230 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.79■□□□□ 0.76
CHRNB1P11230 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.79■□□□□ 0.76
CHRNB1P11230 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNB1P11230 AL353719.1-201ENST00000566847 864 ntBASIC19.79■□□□□ 0.76
CHRNB1P11230 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNB1P11230 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.79■□□□□ 0.76
CHRNB1P11230 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNB1P11230 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNB1P11230 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNB1P11230 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
CHRNB1P11230 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHRNB1P11230 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNB1P11230 TMEM179-206ENST00000616017 1645 ntBASIC19.78■□□□□ 0.76
CHRNB1P11230 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNB1P11230 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNB1P11230 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNB1P11230 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.78■□□□□ 0.76
CHRNB1P11230 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNB1P11230 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.78■□□□□ 0.76
CHRNB1P11230 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.78■□□□□ 0.76
CHRNB1P11230 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.78■□□□□ 0.76
CHRNB1P11230 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.78■□□□□ 0.76
CHRNB1P11230 AL031432.5-201ENST00000641059 760 ntBASIC19.78■□□□□ 0.76
CHRNB1P11230 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHRNB1P11230 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CHRNB1P11230 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.78■□□□□ 0.76
CHRNB1P11230 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNB1P11230 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNB1P11230 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB1P11230 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB1P11230 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB1P11230 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB1P11230 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.77■□□□□ 0.76
CHRNB1P11230 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB1P11230 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.77■□□□□ 0.76
CHRNB1P11230 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.77■□□□□ 0.76
CHRNB1P11230 KRT18P48-201ENST00000434763 852 ntBASIC19.77■□□□□ 0.76
CHRNB1P11230 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHRNB1P11230 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms