Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC073130.3-201ENST00000624389 2278 ntBASIC22.01■■□□□ 1.11
CYP3A4P08684 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.01■■□□□ 1.11
CYP3A4P08684 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.01■■□□□ 1.11
CYP3A4P08684 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.01■■□□□ 1.11
CYP3A4P08684 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.01■■□□□ 1.11
CYP3A4P08684 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CYP3A4P08684 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 AL355075.4-201ENST00000554988 638 ntBASIC22.01■■□□□ 1.11
CYP3A4P08684 AL160286.2-201ENST00000567150 934 ntBASIC22.01■■□□□ 1.11
CYP3A4P08684 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CYP3A4P08684 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22■■□□□ 1.11
CYP3A4P08684 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22■■□□□ 1.11
CYP3A4P08684 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22■■□□□ 1.11
CYP3A4P08684 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22■■□□□ 1.11
CYP3A4P08684 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CYP3A4P08684 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22■■□□□ 1.11
CYP3A4P08684 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22■■□□□ 1.11
CYP3A4P08684 TSPY15P-201ENST00000457163 923 ntBASIC22■■□□□ 1.11
CYP3A4P08684 Z85996.1-201ENST00000494644 937 ntBASIC22■■□□□ 1.11
CYP3A4P08684 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22■■□□□ 1.11
CYP3A4P08684 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22■■□□□ 1.11
CYP3A4P08684 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CYP3A4P08684 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22■■□□□ 1.11
CYP3A4P08684 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22■■□□□ 1.11
CYP3A4P08684 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22■■□□□ 1.11
CYP3A4P08684 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22■■□□□ 1.11
CYP3A4P08684 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CYP3A4P08684 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22■■□□□ 1.11
CYP3A4P08684 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.99■■□□□ 1.11
CYP3A4P08684 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP3A4P08684 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP3A4P08684 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 FSCN1P1-201ENST00000568912 1481 ntBASIC21.99■■□□□ 1.11
CYP3A4P08684 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CYP3A4P08684 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 AC011506.1-201ENST00000474329 610 ntBASIC21.99■■□□□ 1.11
CYP3A4P08684 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP3A4P08684 MIR6786-201ENST00000616843 113 ntBASIC21.99■■□□□ 1.11
CYP3A4P08684 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.99■■□□□ 1.11
CYP3A4P08684 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CYP3A4P08684 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP3A4P08684 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP3A4P08684 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CYP3A4P08684 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.99■■□□□ 1.11
CYP3A4P08684 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.99■■□□□ 1.11
CYP3A4P08684 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.98■■□□□ 1.11
CYP3A4P08684 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP3A4P08684 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP3A4P08684 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CYP3A4P08684 B3GAT3P1-201ENST00000471720 806 ntBASIC21.98■■□□□ 1.11
CYP3A4P08684 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CYP3A4P08684 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.98■■□□□ 1.11
CYP3A4P08684 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.98■■□□□ 1.11
CYP3A4P08684 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.98■■□□□ 1.11
CYP3A4P08684 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.98■■□□□ 1.11
CYP3A4P08684 AC130371.2-201ENST00000619443 611 ntBASIC21.98■■□□□ 1.11
CYP3A4P08684 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.98■■□□□ 1.11
CYP3A4P08684 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP3A4P08684 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP3A4P08684 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CYP3A4P08684 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.98■■□□□ 1.11
CYP3A4P08684 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.98■■□□□ 1.11
CYP3A4P08684 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CYP3A4P08684 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP3A4P08684 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP3A4P08684 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CYP3A4P08684 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.97■■□□□ 1.11
CYP3A4P08684 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.97■■□□□ 1.11
CYP3A4P08684 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.97■■□□□ 1.11
CYP3A4P08684 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CYP3A4P08684 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms