Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.7■□□□□ 0.74
RETP07949 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RETP07949 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RETP07949 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.69■□□□□ 0.74
RETP07949 DUSP5P1-201ENST00000441325 1139 ntBASIC19.69■□□□□ 0.74
RETP07949 FAM207BP-201ENST00000447172 505 ntBASIC19.69■□□□□ 0.74
RETP07949 AC092647.4-201ENST00000457211 535 ntBASIC19.69■□□□□ 0.74
RETP07949 B3GAT3P1-201ENST00000471720 806 ntBASIC19.69■□□□□ 0.74
RETP07949 AC097488.1-201ENST00000507834 756 ntBASIC19.69■□□□□ 0.74
RETP07949 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 AC139887.4-201ENST00000607877 719 ntBASIC19.69■□□□□ 0.74
RETP07949 AL445675.2-201ENST00000620291 557 ntBASIC19.69■□□□□ 0.74
RETP07949 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.69■□□□□ 0.74
RETP07949 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RETP07949 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.69■□□□□ 0.74
RETP07949 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
RETP07949 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.68■□□□□ 0.74
RETP07949 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.68■□□□□ 0.74
RETP07949 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.68■□□□□ 0.74
RETP07949 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.68■□□□□ 0.74
RETP07949 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.68■□□□□ 0.74
RETP07949 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.68■□□□□ 0.74
RETP07949 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.68■□□□□ 0.74
RETP07949 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.68■□□□□ 0.74
RETP07949 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.68■□□□□ 0.74
RETP07949 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.68■□□□□ 0.74
RETP07949 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RETP07949 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 AC073314.1-201ENST00000568729 2216 ntBASIC19.68■□□□□ 0.74
RETP07949 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.68■□□□□ 0.74
RETP07949 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RETP07949 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.67■□□□□ 0.74
RETP07949 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 PLK5-205ENST00000642079 1969 ntBASIC19.67■□□□□ 0.74
RETP07949 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 HLA-G-202ENST00000376815 851 ntBASIC19.67■□□□□ 0.74
RETP07949 HLA-G-203ENST00000376818 1127 ntBASIC19.67■□□□□ 0.74
RETP07949 TSPY5P-201ENST00000426936 936 ntBASIC19.67■□□□□ 0.74
RETP07949 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.67■□□□□ 0.74
RETP07949 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.67■□□□□ 0.74
RETP07949 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RETP07949 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.67■□□□□ 0.74
RETP07949 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.66■□□□□ 0.74
RETP07949 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 INGX-201ENST00000359239 846 ntBASIC19.66■□□□□ 0.74
RETP07949 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.66■□□□□ 0.74
RETP07949 PCED1CP-201ENST00000419887 785 ntBASIC19.66■□□□□ 0.74
RETP07949 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.66■□□□□ 0.74
RETP07949 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.66■□□□□ 0.74
RETP07949 AL121956.5-201ENST00000625261 221 ntBASIC19.66■□□□□ 0.74
RETP07949 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RETP07949 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.65■□□□□ 0.74
RETP07949 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RETP07949 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
RETP07949 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RETP07949 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RETP07949 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 YBX1P2-201ENST00000489612 999 ntBASIC19.65■□□□□ 0.74
RETP07949 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RETP07949 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.65■□□□□ 0.74
RETP07949 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.65■□□□□ 0.74
RETP07949 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms