Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HLA-DOAP06340 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 AC096733.2-201ENST00000609937 1394 ntBASIC23.01■■□□□ 1.27
HLA-DOAP06340 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DOAP06340 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DOAP06340 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 KRT18P57-201ENST00000443599 1254 ntBASIC23.01■■□□□ 1.27
HLA-DOAP06340 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.01■■□□□ 1.27
HLA-DOAP06340 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DOAP06340 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DOAP06340 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DOAP06340 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HLA-DOAP06340 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23■■□□□ 1.27
HLA-DOAP06340 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DOAP06340 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23■■□□□ 1.27
HLA-DOAP06340 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DOAP06340 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DOAP06340 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23■■□□□ 1.27
HLA-DOAP06340 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23■■□□□ 1.27
HLA-DOAP06340 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23■■□□□ 1.27
HLA-DOAP06340 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HLA-DOAP06340 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23■■□□□ 1.27
HLA-DOAP06340 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DOAP06340 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DOAP06340 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DOAP06340 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DOAP06340 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DOAP06340 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
HLA-DOAP06340 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DOAP06340 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 ECEL1P2-202ENST00000465689 757 ntBASIC22.98■■□□□ 1.27
HLA-DOAP06340 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 AL049597.2-201ENST00000565575 961 ntBASIC22.98■■□□□ 1.27
HLA-DOAP06340 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DOAP06340 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.98■■□□□ 1.27
HLA-DOAP06340 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.97■■□□□ 1.27
HLA-DOAP06340 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 LIN28AP1-201ENST00000429574 405 ntBASIC22.97■■□□□ 1.27
HLA-DOAP06340 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 AC092667.1-201ENST00000434301 2586 ntBASIC22.97■■□□□ 1.27
HLA-DOAP06340 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
HLA-DOAP06340 AC073508.3-201ENST00000619697 1419 ntBASIC22.97■■□□□ 1.27
HLA-DOAP06340 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DOAP06340 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DOAP06340 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DOAP06340 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DOAP06340 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DOAP06340 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.96■■□□□ 1.27
HLA-DOAP06340 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.96■■□□□ 1.27
HLA-DOAP06340 ATP5G1P1-201ENST00000448724 379 ntBASIC22.96■■□□□ 1.27
HLA-DOAP06340 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.96■■□□□ 1.27
HLA-DOAP06340 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.96■■□□□ 1.27
HLA-DOAP06340 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.96■■□□□ 1.27
HLA-DOAP06340 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DOAP06340 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DOAP06340 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms