Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.43■□□□□ 0.86
APOEP02649 YBX1P10-201ENST00000444752 975 ntBASIC20.43■□□□□ 0.86
APOEP02649 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.43■□□□□ 0.86
APOEP02649 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.43■□□□□ 0.86
APOEP02649 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.43■□□□□ 0.86
APOEP02649 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
APOEP02649 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.42■□□□□ 0.86
APOEP02649 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
APOEP02649 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
APOEP02649 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.42■□□□□ 0.86
APOEP02649 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.41■□□□□ 0.86
APOEP02649 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.41■□□□□ 0.86
APOEP02649 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
APOEP02649 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
APOEP02649 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOEP02649 KRT16P5-201ENST00000455284 522 ntBASIC20.41■□□□□ 0.86
APOEP02649 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.41■□□□□ 0.86
APOEP02649 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.41■□□□□ 0.86
APOEP02649 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
APOEP02649 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
APOEP02649 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOEP02649 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.41■□□□□ 0.86
APOEP02649 AC009237.14-201ENST00000609975 1594 ntBASIC20.41■□□□□ 0.86
APOEP02649 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOEP02649 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.41■□□□□ 0.86
APOEP02649 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOEP02649 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOEP02649 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
APOEP02649 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
APOEP02649 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
APOEP02649 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.4■□□□□ 0.86
APOEP02649 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.4■□□□□ 0.86
APOEP02649 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
APOEP02649 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
APOEP02649 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.4■□□□□ 0.86
APOEP02649 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
APOEP02649 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.4■□□□□ 0.86
APOEP02649 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.4■□□□□ 0.86
APOEP02649 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.4■□□□□ 0.86
APOEP02649 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.4■□□□□ 0.86
APOEP02649 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
APOEP02649 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
APOEP02649 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APOEP02649 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APOEP02649 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
APOEP02649 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
APOEP02649 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.39■□□□□ 0.85
APOEP02649 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.39■□□□□ 0.85
APOEP02649 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.39■□□□□ 0.85
APOEP02649 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.39■□□□□ 0.85
APOEP02649 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.39■□□□□ 0.85
APOEP02649 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
APOEP02649 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.39■□□□□ 0.85
APOEP02649 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.39■□□□□ 0.85
APOEP02649 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APOEP02649 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms