Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.6■■□□□ 1.05
CD4P01730 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.6■■□□□ 1.05
CD4P01730 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CD4P01730 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.6■■□□□ 1.05
CD4P01730 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CD4P01730 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.59■■□□□ 1.05
CD4P01730 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CD4P01730 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
CD4P01730 AL121956.5-201ENST00000625261 221 ntBASIC21.59■■□□□ 1.05
CD4P01730 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CD4P01730 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CD4P01730 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD4P01730 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CD4P01730 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD4P01730 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD4P01730 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CD4P01730 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
CD4P01730 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.58■■□□□ 1.05
CD4P01730 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.58■■□□□ 1.05
CD4P01730 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.58■■□□□ 1.05
CD4P01730 AC092647.4-201ENST00000457211 535 ntBASIC21.58■■□□□ 1.05
CD4P01730 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.58■■□□□ 1.05
CD4P01730 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.58■■□□□ 1.05
CD4P01730 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.58■■□□□ 1.05
CD4P01730 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.58■■□□□ 1.05
CD4P01730 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CD4P01730 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CD4P01730 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD4P01730 PHGDH-210ENST00000641115 1638 ntBASIC21.58■■□□□ 1.04
CD4P01730 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CD4P01730 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CD4P01730 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CD4P01730 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 PCED1CP-201ENST00000419887 785 ntBASIC21.57■■□□□ 1.04
CD4P01730 Z85996.1-201ENST00000494644 937 ntBASIC21.57■■□□□ 1.04
CD4P01730 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.57■■□□□ 1.04
CD4P01730 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CD4P01730 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.57■■□□□ 1.04
CD4P01730 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CD4P01730 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CD4P01730 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CD4P01730 TSPY17P-201ENST00000450329 467 ntBASIC21.56■■□□□ 1.04
CD4P01730 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.56■■□□□ 1.04
CD4P01730 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.56■■□□□ 1.04
CD4P01730 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.56■■□□□ 1.04
CD4P01730 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.56■■□□□ 1.04
CD4P01730 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CD4P01730 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.56■■□□□ 1.04
CD4P01730 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.55■■□□□ 1.04
CD4P01730 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD4P01730 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.55■■□□□ 1.04
CD4P01730 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD4P01730 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CD4P01730 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.55■■□□□ 1.04
CD4P01730 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD4P01730 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD4P01730 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.55■■□□□ 1.04
CD4P01730 KRT18P48-201ENST00000434763 852 ntBASIC21.55■■□□□ 1.04
CD4P01730 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.55■■□□□ 1.04
CD4P01730 AL353719.1-201ENST00000566847 864 ntBASIC21.55■■□□□ 1.04
CD4P01730 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.55■■□□□ 1.04
CD4P01730 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CD4P01730 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
CD4P01730 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.55■■□□□ 1.04
CD4P01730 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CD4P01730 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CD4P01730 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CD4P01730 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms