Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGK1P00558 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PGK1P00558 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.76■■□□□ 1.07
PGK1P00558 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.76■■□□□ 1.07
PGK1P00558 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.76■■□□□ 1.07
PGK1P00558 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.76■■□□□ 1.07
PGK1P00558 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.76■■□□□ 1.07
PGK1P00558 AC140113.3-201ENST00000605663 199 ntBASIC21.76■■□□□ 1.07
PGK1P00558 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PGK1P00558 AL031432.5-201ENST00000641059 760 ntBASIC21.76■■□□□ 1.07
PGK1P00558 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PGK1P00558 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PGK1P00558 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 TPM4P1-201ENST00000436100 807 ntBASIC21.75■■□□□ 1.07
PGK1P00558 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 HOMER2P1-201ENST00000455653 964 ntBASIC21.75■■□□□ 1.07
PGK1P00558 AL671277.2-201ENST00000458060 996 ntBASIC21.75■■□□□ 1.07
PGK1P00558 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.75■■□□□ 1.07
PGK1P00558 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.75■■□□□ 1.07
PGK1P00558 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.75■■□□□ 1.07
PGK1P00558 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.75■■□□□ 1.07
PGK1P00558 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PGK1P00558 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.74■■□□□ 1.07
PGK1P00558 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.74■■□□□ 1.07
PGK1P00558 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PGK1P00558 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.74■■□□□ 1.07
PGK1P00558 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.74■■□□□ 1.07
PGK1P00558 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
PGK1P00558 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.74■■□□□ 1.07
PGK1P00558 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.74■■□□□ 1.07
PGK1P00558 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.74■■□□□ 1.07
PGK1P00558 AL160286.2-201ENST00000567150 934 ntBASIC21.74■■□□□ 1.07
PGK1P00558 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.74■■□□□ 1.07
PGK1P00558 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PGK1P00558 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PGK1P00558 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.74■■□□□ 1.07
PGK1P00558 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGK1P00558 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGK1P00558 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGK1P00558 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGK1P00558 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PGK1P00558 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGK1P00558 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.73■■□□□ 1.07
PGK1P00558 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.73■■□□□ 1.07
PGK1P00558 DUSP5P1-201ENST00000441325 1139 ntBASIC21.73■■□□□ 1.07
PGK1P00558 AL512604.3-201ENST00000569583 964 ntBASIC21.73■■□□□ 1.07
PGK1P00558 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.73■■□□□ 1.07
PGK1P00558 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
PGK1P00558 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.73■■□□□ 1.07
PGK1P00558 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PGK1P00558 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PGK1P00558 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.72■■□□□ 1.07
PGK1P00558 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PGK1P00558 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.72■■□□□ 1.07
PGK1P00558 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PGK1P00558 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 KRT18P38-201ENST00000449496 1282 ntBASIC21.72■■□□□ 1.07
PGK1P00558 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.72■■□□□ 1.07
PGK1P00558 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PGK1P00558 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.72■■□□□ 1.07
PGK1P00558 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 AC005332.1-201ENST00000577698 1310 ntBASIC21.72■■□□□ 1.07
PGK1P00558 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 AC026310.3-201ENST00000625186 2373 ntBASIC21.72■■□□□ 1.07
PGK1P00558 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGK1P00558 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 AC007375.3-201ENST00000600936 2314 ntBASIC21.71■■□□□ 1.07
PGK1P00558 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.71■■□□□ 1.07
PGK1P00558 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.71■■□□□ 1.07
PGK1P00558 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 AP003041.3-201ENST00000527151 707 ntBASIC21.71■■□□□ 1.07
PGK1P00558 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGK1P00558 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.71■■□□□ 1.07
PGK1P00558 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms