Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 AC011498.5-201ENST00000592027 486 ntBASIC29.39■■■□□ 2.3
RAPGEF3O95398 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 AL671883.3-201ENST00000603274 991 ntBASIC29.39■■■□□ 2.3
RAPGEF3O95398 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC29.39■■■□□ 2.3
RAPGEF3O95398 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RAPGEF3O95398 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC29.39■■■□□ 2.29
RAPGEF3O95398 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF3O95398 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF3O95398 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
RAPGEF3O95398 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF3O95398 NUS1P1-201ENST00000446295 882 ntBASIC29.38■■■□□ 2.29
RAPGEF3O95398 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC29.38■■■□□ 2.29
RAPGEF3O95398 AL160237.2-201ENST00000556165 472 ntBASIC29.38■■■□□ 2.29
RAPGEF3O95398 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
RAPGEF3O95398 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
RAPGEF3O95398 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
RAPGEF3O95398 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC29.37■■■□□ 2.29
RAPGEF3O95398 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC29.37■■■□□ 2.29
RAPGEF3O95398 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RAPGEF3O95398 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC29.37■■■□□ 2.29
RAPGEF3O95398 PLK5-205ENST00000642079 1969 ntBASIC29.37■■■□□ 2.29
RAPGEF3O95398 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RAPGEF3O95398 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RAPGEF3O95398 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RAPGEF3O95398 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RAPGEF3O95398 AP002414.4-201ENST00000589764 1148 ntBASIC29.36■■■□□ 2.29
RAPGEF3O95398 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC29.36■■■□□ 2.29
RAPGEF3O95398 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
RAPGEF3O95398 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF3O95398 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.35■■■□□ 2.29
RAPGEF3O95398 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF3O95398 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF3O95398 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
RAPGEF3O95398 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC29.35■■■□□ 2.29
RAPGEF3O95398 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.35■■■□□ 2.29
RAPGEF3O95398 AL121672.3-201ENST00000608644 468 ntBASIC29.35■■■□□ 2.29
RAPGEF3O95398 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC29.35■■■□□ 2.29
RAPGEF3O95398 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF3O95398 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF3O95398 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RAPGEF3O95398 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF3O95398 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF3O95398 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF3O95398 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 TSPY19P-201ENST00000418461 509 ntBASIC29.34■■■□□ 2.29
RAPGEF3O95398 TSPY18P-201ENST00000441642 509 ntBASIC29.34■■■□□ 2.29
RAPGEF3O95398 BX276092.5-203ENST00000456199 560 ntBASIC29.34■■■□□ 2.29
RAPGEF3O95398 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 MIR4674-201ENST00000582457 87 ntBASIC29.34■■■□□ 2.29
RAPGEF3O95398 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF3O95398 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF3O95398 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RAPGEF3O95398 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
RAPGEF3O95398 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF3O95398 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF3O95398 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF3O95398 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
RAPGEF3O95398 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC29.33■■■□□ 2.29
RAPGEF3O95398 SLC25A6P4-201ENST00000586535 553 ntBASIC29.33■■■□□ 2.29
RAPGEF3O95398 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF3O95398 AC139530.3-201ENST00000620344 690 ntBASIC29.33■■■□□ 2.29
RAPGEF3O95398 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF3O95398 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC29.33■■■□□ 2.29
RAPGEF3O95398 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
RAPGEF3O95398 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RAPGEF3O95398 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms