Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP1O94782 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP1O94782 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.72■□□□□ 0.75
USP1O94782 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP1O94782 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 GUSBP6-202ENST00000438529 1198 ntBASIC19.72■□□□□ 0.75
USP1O94782 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.72■□□□□ 0.75
USP1O94782 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
USP1O94782 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.72■□□□□ 0.75
USP1O94782 AC104771.1-201ENST00000603335 964 ntBASIC19.72■□□□□ 0.75
USP1O94782 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP1O94782 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 AC026471.1-201ENST00000564629 3026 ntBASIC19.72■□□□□ 0.75
USP1O94782 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
USP1O94782 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
USP1O94782 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP1O94782 TNXA-203ENST00000507684 2038 ntBASIC19.71■□□□□ 0.75
USP1O94782 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.71■□□□□ 0.75
USP1O94782 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP1O94782 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.71■□□□□ 0.75
USP1O94782 TSPY6P-201ENST00000448518 926 ntBASIC19.71■□□□□ 0.75
USP1O94782 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
USP1O94782 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.71■□□□□ 0.75
USP1O94782 AL109923.1-201ENST00000618799 583 ntBASIC19.71■□□□□ 0.75
USP1O94782 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
USP1O94782 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP1O94782 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP1O94782 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.7■□□□□ 0.74
USP1O94782 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP1O94782 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP1O94782 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
USP1O94782 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.7■□□□□ 0.74
USP1O94782 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP1O94782 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.7■□□□□ 0.74
USP1O94782 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.7■□□□□ 0.74
USP1O94782 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.7■□□□□ 0.74
USP1O94782 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.7■□□□□ 0.74
USP1O94782 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.7■□□□□ 0.74
USP1O94782 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.7■□□□□ 0.74
USP1O94782 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP1O94782 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.69■□□□□ 0.74
USP1O94782 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.69■□□□□ 0.74
USP1O94782 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
USP1O94782 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP1O94782 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.69■□□□□ 0.74
USP1O94782 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
USP1O94782 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP1O94782 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.68■□□□□ 0.74
USP1O94782 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms