Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF2O60811 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF2O60811 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF2O60811 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF2O60811 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 MIR4785-201ENST00000585005 73 ntBASIC18.31■□□□□ 0.52
PRAMEF2O60811 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 AP006587.1-201ENST00000534129 1502 ntBASIC18.31■□□□□ 0.52
PRAMEF2O60811 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF2O60811 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF2O60811 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 AC007952.6-201ENST00000573168 2673 ntBASIC18.3■□□□□ 0.52
PRAMEF2O60811 AC003957.1-201ENST00000625108 2673 ntBASIC18.3■□□□□ 0.52
PRAMEF2O60811 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.3■□□□□ 0.52
PRAMEF2O60811 REXO1L12P-201ENST00000622156 912 ntBASIC18.3■□□□□ 0.52
PRAMEF2O60811 AC113410.3-201ENST00000623366 203 ntBASIC18.3■□□□□ 0.52
PRAMEF2O60811 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF2O60811 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
PRAMEF2O60811 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PRAMEF2O60811 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms