Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.6■□□□□ 0.89
DCXO43602 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.6■□□□□ 0.89
DCXO43602 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.6■□□□□ 0.89
DCXO43602 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.6■□□□□ 0.89
DCXO43602 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DCXO43602 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.6■□□□□ 0.89
DCXO43602 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.6■□□□□ 0.89
DCXO43602 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
DCXO43602 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
DCXO43602 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.59■□□□□ 0.89
DCXO43602 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.59■□□□□ 0.89
DCXO43602 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DCXO43602 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.58■□□□□ 0.89
DCXO43602 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DCXO43602 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.58■□□□□ 0.89
DCXO43602 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
DCXO43602 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
DCXO43602 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DCXO43602 INGX-201ENST00000359239 846 ntBASIC20.58■□□□□ 0.89
DCXO43602 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DCXO43602 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DCXO43602 MESTP1-201ENST00000404287 994 ntBASIC20.58■□□□□ 0.89
DCXO43602 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.58■□□□□ 0.89
DCXO43602 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.58■□□□□ 0.89
DCXO43602 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.58■□□□□ 0.89
DCXO43602 AC026271.3-201ENST00000571884 352 ntBASIC20.58■□□□□ 0.89
DCXO43602 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.58■□□□□ 0.89
DCXO43602 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.58■□□□□ 0.89
DCXO43602 AL138966.2-201ENST00000621997 464 ntBASIC20.58■□□□□ 0.89
DCXO43602 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DCXO43602 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
DCXO43602 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
DCXO43602 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.58■□□□□ 0.88
DCXO43602 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DCXO43602 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.58■□□□□ 0.88
DCXO43602 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DCXO43602 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
DCXO43602 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
DCXO43602 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DCXO43602 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
DCXO43602 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.57■□□□□ 0.88
DCXO43602 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
DCXO43602 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.57■□□□□ 0.88
DCXO43602 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DCXO43602 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DCXO43602 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.57■□□□□ 0.88
DCXO43602 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
DCXO43602 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DCXO43602 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DCXO43602 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DCXO43602 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.56■□□□□ 0.88
DCXO43602 COX11P1-201ENST00000489116 835 ntBASIC20.56■□□□□ 0.88
DCXO43602 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.56■□□□□ 0.88
DCXO43602 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.56■□□□□ 0.88
DCXO43602 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DCXO43602 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.56■□□□□ 0.88
DCXO43602 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DCXO43602 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.56■□□□□ 0.88
DCXO43602 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DCXO43602 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DCXO43602 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DCXO43602 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms