Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHL1O00533 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHL1O00533 RCC2P6-201ENST00000526625 1557 ntBASIC25.17■■□□□ 1.62
CHL1O00533 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHL1O00533 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHL1O00533 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHL1O00533 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.16■■□□□ 1.62
CHL1O00533 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC25.16■■□□□ 1.62
CHL1O00533 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.16■■□□□ 1.62
CHL1O00533 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 AL160286.2-201ENST00000567150 934 ntBASIC25.16■■□□□ 1.62
CHL1O00533 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHL1O00533 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CHL1O00533 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
CHL1O00533 TREX1-205ENST00000625293 1783 ntBASIC25.16■■□□□ 1.62
CHL1O00533 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.15■■□□□ 1.62
CHL1O00533 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.15■■□□□ 1.62
CHL1O00533 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.15■■□□□ 1.62
CHL1O00533 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.15■■□□□ 1.62
CHL1O00533 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.15■■□□□ 1.62
CHL1O00533 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CHL1O00533 AP000525.1-201ENST00000608286 694 ntBASIC25.15■■□□□ 1.62
CHL1O00533 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHL1O00533 PCDHAC2-203ENST00000615316 3011 ntBASIC25.15■■□□□ 1.62
CHL1O00533 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.15■■□□□ 1.62
CHL1O00533 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHL1O00533 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHL1O00533 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC25.14■■□□□ 1.62
CHL1O00533 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHL1O00533 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHL1O00533 UNC93B2-201ENST00000285383 730 ntBASIC25.14■■□□□ 1.62
CHL1O00533 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHL1O00533 AC087499.1-201ENST00000418141 1075 ntBASIC25.14■■□□□ 1.62
CHL1O00533 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
CHL1O00533 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.14■■□□□ 1.62
CHL1O00533 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.14■■□□□ 1.62
CHL1O00533 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.14■■□□□ 1.62
CHL1O00533 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.14■■□□□ 1.62
CHL1O00533 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.14■■□□□ 1.62
CHL1O00533 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHL1O00533 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.14■■□□□ 1.62
CHL1O00533 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC25.14■■□□□ 1.61
CHL1O00533 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHL1O00533 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHL1O00533 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHL1O00533 KRT8P9-201ENST00000558927 1449 ntBASIC25.13■■□□□ 1.61
CHL1O00533 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHL1O00533 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHL1O00533 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC25.13■■□□□ 1.61
CHL1O00533 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHL1O00533 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHL1O00533 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
CHL1O00533 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.13■■□□□ 1.61
CHL1O00533 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.13■■□□□ 1.61
CHL1O00533 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.13■■□□□ 1.61
CHL1O00533 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC25.13■■□□□ 1.61
CHL1O00533 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CHL1O00533 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 KRT8P41-201ENST00000533985 1514 ntBASIC25.12■■□□□ 1.61
CHL1O00533 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CHL1O00533 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC25.12■■□□□ 1.61
CHL1O00533 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.12■■□□□ 1.61
CHL1O00533 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 AC211429.1-201ENST00000415277 523 ntBASIC25.12■■□□□ 1.61
CHL1O00533 AC091390.4-202ENST00000476426 537 ntBASIC25.12■■□□□ 1.61
CHL1O00533 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 FITM1-202ENST00000559294 800 ntBASIC25.12■■□□□ 1.61
CHL1O00533 AC012306.2-201ENST00000609350 630 ntBASIC25.12■■□□□ 1.61
CHL1O00533 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CHL1O00533 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CHL1O00533 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CHL1O00533 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CHL1O00533 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 AC073130.3-201ENST00000624389 2278 ntBASIC25.12■■□□□ 1.61
CHL1O00533 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHL1O00533 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms