Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.81■□□□□ 0.92
O00370 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.81■□□□□ 0.92
O00370 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
O00370 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.81■□□□□ 0.92
O00370 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
O00370 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
O00370 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 NBPF21P-201ENST00000425093 1451 ntBASIC20.81■□□□□ 0.92
O00370 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
O00370 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
O00370 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.8■□□□□ 0.92
O00370 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.8■□□□□ 0.92
O00370 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
O00370 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
O00370 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
O00370 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.8■□□□□ 0.92
O00370 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.8■□□□□ 0.92
O00370 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.8■□□□□ 0.92
O00370 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.8■□□□□ 0.92
O00370 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
O00370 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
O00370 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.8■□□□□ 0.92
O00370 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.79■□□□□ 0.92
O00370 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
O00370 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
O00370 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
O00370 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
O00370 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
O00370 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.79■□□□□ 0.92
O00370 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
O00370 AC098590.1-201ENST00000468126 897 ntBASIC20.79■□□□□ 0.92
O00370 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
O00370 KRT18P16-201ENST00000510337 1294 ntBASIC20.79■□□□□ 0.92
O00370 C1QBPP2-201ENST00000528754 825 ntBASIC20.79■□□□□ 0.92
O00370 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.79■□□□□ 0.92
O00370 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
O00370 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
O00370 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.79■□□□□ 0.92
O00370 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
O00370 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.79■□□□□ 0.92
O00370 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.79■□□□□ 0.92
O00370 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
O00370 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
O00370 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
O00370 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.78■□□□□ 0.92
O00370 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.78■□□□□ 0.92
O00370 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.78■□□□□ 0.92
O00370 RPPH1-201ENST00000516869 333 ntBASIC20.78■□□□□ 0.92
O00370 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
O00370 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.78■□□□□ 0.92
O00370 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
O00370 BX323043.1-201ENST00000641006 1765 ntBASIC20.77■□□□□ 0.92
O00370 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
O00370 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
O00370 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
O00370 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
O00370 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.77■□□□□ 0.92
O00370 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
O00370 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.77■□□□□ 0.92
O00370 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.77■□□□□ 0.92
O00370 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.77■□□□□ 0.92
O00370 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.77■□□□□ 0.92
O00370 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.77■□□□□ 0.92
O00370 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.77■□□□□ 0.92
O00370 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.77■□□□□ 0.92
O00370 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
O00370 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.77■□□□□ 0.92
O00370 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
O00370 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.77■□□□□ 0.91
O00370 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
O00370 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
O00370 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
O00370 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
O00370 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
O00370 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms