Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 TERF1P5-201ENST00000477545 1207 ntBASIC16.65■□□□□ 0.26
TMEM235A6NFC5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 AC016405.3-201ENST00000607710 860 ntBASIC16.65■□□□□ 0.26
TMEM235A6NFC5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 HCG11-201ENST00000411553 5696 ntBASIC16.65■□□□□ 0.26
TMEM235A6NFC5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM235A6NFC5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
TMEM235A6NFC5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM235A6NFC5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM235A6NFC5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.64■□□□□ 0.25
TMEM235A6NFC5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM235A6NFC5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 HLA-G-202ENST00000376815 851 ntBASIC16.63■□□□□ 0.25
TMEM235A6NFC5 HLA-G-203ENST00000376818 1127 ntBASIC16.63■□□□□ 0.25
TMEM235A6NFC5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 KRT18P61-201ENST00000585825 1298 ntBASIC16.63■□□□□ 0.25
TMEM235A6NFC5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM235A6NFC5 AC090340.1-201ENST00000620778 4980 ntBASIC16.63■□□□□ 0.25
TMEM235A6NFC5 AC009113.1-201ENST00000570267 2443 ntBASIC16.62■□□□□ 0.25
TMEM235A6NFC5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 AC006333.2-201ENST00000607957 2099 ntBASIC16.62■□□□□ 0.25
TMEM235A6NFC5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM235A6NFC5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms