Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 AC112907.2-201ENST00000448639 330 ntBASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 HYMAI.1-201ENST00000620949 238 ntBASIC30.14■■■□□ 2.42
PLEKHD1A6NEE1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
PLEKHD1A6NEE1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 AC083849.1-201ENST00000615227 514 ntBASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC30.13■■■□□ 2.41
PLEKHD1A6NEE1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 FXN-203ENST00000396366 922 ntTSL 2 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 AP000523.1-201ENST00000398242 1049 ntBASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 ZNF444P1-201ENST00000559497 298 ntBASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC30.12■■■□□ 2.41
PLEKHD1A6NEE1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 AP001271.2-201ENST00000624018 1556 ntBASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PLEKHD1A6NEE1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 AC079834.2-201ENST00000609776 1949 ntBASIC30.1■■■□□ 2.41
PLEKHD1A6NEE1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 STARP1-201ENST00000397973 869 ntBASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 NEK4P2-201ENST00000580004 1012 ntBASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC30.09■■■□□ 2.41
PLEKHD1A6NEE1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC30.08■■■□□ 2.41
PLEKHD1A6NEE1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.07■■■□□ 2.4
PLEKHD1A6NEE1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms