Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 AL355472.2-201ENST00000422958 438 ntBASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 AL032819.2-201ENST00000624543 2162 ntBASIC14.56□□□□□ -0.08
TRBV7-9A0A0J9YWB2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TNXA-203ENST00000507684 2038 ntBASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 LSM12P1-201ENST00000411836 588 ntBASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV7-9A0A0J9YWB2 LINC01465-201ENST00000408887 1940 ntBASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 BCL2-203ENST00000589955 5011 ntBASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 AC018553.1-201ENST00000616682 1458 ntBASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-9A0A0J9YWB2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms