Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 AL161938.1-201ENST00000569833 2180 ntBASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV18A0A075B6X5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 AC027612.3-201ENST00000413684 1047 ntBASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 SUDS3P1-201ENST00000505831 966 ntBASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 TERF1P2-201ENST00000583350 1212 ntBASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV18A0A075B6X5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV18A0A075B6X5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV18A0A075B6X5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV18A0A075B6X5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV18A0A075B6X5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TRAV18A0A075B6X5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 AC009113.1-201ENST00000570267 2443 ntBASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 AC005332.8-201ENST00000622750 2735 ntBASIC16.76■□□□□ 0.27
TRAV18A0A075B6X5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms