Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 FP475955.4-201ENST00000623131 1990 ntBASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV9-1A0A075B6T8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV9-1A0A075B6T8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 AC010997.5-201ENST00000609182 354 ntBASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 AC009053.2-201ENST00000563701 2365 ntBASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV9-1A0A075B6T8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 AC005224.4-201ENST00000583262 1652 ntBASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 YBX1P4-201ENST00000392794 808 ntBASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 AL031848.2-201ENST00000607670 837 ntBASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 AC008175.2-201ENST00000612840 297 ntBASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV9-1A0A075B6T8 ESPNP-201ENST00000270691 2015 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms