Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
SMARCC2Q8TAQ2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.16■■■□□ 2.42
SMARCC2Q8TAQ2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.15■■■□□ 2.42
SMARCC2Q8TAQ2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.15■■■□□ 2.42
SMARCC2Q8TAQ2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.15■■■□□ 2.42
SMARCC2Q8TAQ2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SMARCC2Q8TAQ2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SMARCC2Q8TAQ2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
SMARCC2Q8TAQ2 AC021231.2-201ENST00000594613 730 ntBASIC30.13■■■□□ 2.41
SMARCC2Q8TAQ2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.13■■■□□ 2.41
SMARCC2Q8TAQ2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
SMARCC2Q8TAQ2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.12■■■□□ 2.41
SMARCC2Q8TAQ2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.12■■■□□ 2.41
SMARCC2Q8TAQ2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SMARCC2Q8TAQ2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
SMARCC2Q8TAQ2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMARCC2Q8TAQ2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SMARCC2Q8TAQ2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SMARCC2Q8TAQ2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SMARCC2Q8TAQ2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
SMARCC2Q8TAQ2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMARCC2Q8TAQ2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.09■■■□□ 2.41
SMARCC2Q8TAQ2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC2Q8TAQ2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC2Q8TAQ2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SMARCC2Q8TAQ2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCC2Q8TAQ2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCC2Q8TAQ2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCC2Q8TAQ2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SMARCC2Q8TAQ2 ZNRF2P2-203ENST00000454624 420 ntBASIC30.07■■■□□ 2.4
SMARCC2Q8TAQ2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCC2Q8TAQ2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCC2Q8TAQ2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCC2Q8TAQ2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SMARCC2Q8TAQ2 MIR7108-201ENST00000614319 87 ntBASIC30.06■■■□□ 2.4
SMARCC2Q8TAQ2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
SMARCC2Q8TAQ2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCC2Q8TAQ2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMARCC2Q8TAQ2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMARCC2Q8TAQ2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.02■■■□□ 2.4
SMARCC2Q8TAQ2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCC2Q8TAQ2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.02■■■□□ 2.4
SMARCC2Q8TAQ2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMARCC2Q8TAQ2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
SMARCC2Q8TAQ2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMARCC2Q8TAQ2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
SMARCC2Q8TAQ2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SMARCC2Q8TAQ2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
SMARCC2Q8TAQ2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30■■■□□ 2.39
SMARCC2Q8TAQ2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCC2Q8TAQ2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCC2Q8TAQ2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMARCC2Q8TAQ2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.98■■■□□ 2.39
SMARCC2Q8TAQ2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.98■■■□□ 2.39
SMARCC2Q8TAQ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC2Q8TAQ2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMARCC2Q8TAQ2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.97■■■□□ 2.39
SMARCC2Q8TAQ2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.97■■■□□ 2.39
SMARCC2Q8TAQ2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.97■■■□□ 2.39
SMARCC2Q8TAQ2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.97■■■□□ 2.39
SMARCC2Q8TAQ2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
SMARCC2Q8TAQ2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.96■■■□□ 2.39
SMARCC2Q8TAQ2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.96■■■□□ 2.39
SMARCC2Q8TAQ2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SMARCC2Q8TAQ2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SMARCC2Q8TAQ2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.95■■■□□ 2.39
SMARCC2Q8TAQ2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
SMARCC2Q8TAQ2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.94■■■□□ 2.38
SMARCC2Q8TAQ2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
SMARCC2Q8TAQ2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.94■■■□□ 2.38
SMARCC2Q8TAQ2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
SMARCC2Q8TAQ2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SMARCC2Q8TAQ2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
SMARCC2Q8TAQ2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SMARCC2Q8TAQ2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.93■■■□□ 2.38
SMARCC2Q8TAQ2 AC100797.4-201ENST00000631653 1827 ntBASIC29.93■■■□□ 2.38
SMARCC2Q8TAQ2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SMARCC2Q8TAQ2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.92■■■□□ 2.38
SMARCC2Q8TAQ2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SMARCC2Q8TAQ2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SMARCC2Q8TAQ2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SMARCC2Q8TAQ2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SMARCC2Q8TAQ2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SMARCC2Q8TAQ2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SMARCC2Q8TAQ2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.9■■■□□ 2.38
SMARCC2Q8TAQ2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.89■■■□□ 2.38
SMARCC2Q8TAQ2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.89■■■□□ 2.38
SMARCC2Q8TAQ2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
SMARCC2Q8TAQ2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
SMARCC2Q8TAQ2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SMARCC2Q8TAQ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SMARCC2Q8TAQ2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SMARCC2Q8TAQ2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
SMARCC2Q8TAQ2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SMARCC2Q8TAQ2 AC135983.2-203ENST00000454486 1613 ntBASIC29.86■■■□□ 2.37
SMARCC2Q8TAQ2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SMARCC2Q8TAQ2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SMARCC2Q8TAQ2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SMARCC2Q8TAQ2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SMARCC2Q8TAQ2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms