Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cacnb1Q8R3Z5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cacnb1Q8R3Z5 Gm42790-201ENSMUST00000201268 969 ntBASIC26.16■■□□□ 1.78
Cacnb1Q8R3Z5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cacnb1Q8R3Z5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cacnb1Q8R3Z5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cacnb1Q8R3Z5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Cacnb1Q8R3Z5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Cacnb1Q8R3Z5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cacnb1Q8R3Z5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cacnb1Q8R3Z5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.12■■□□□ 1.77
Cacnb1Q8R3Z5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cacnb1Q8R3Z5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Cacnb1Q8R3Z5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.11■■□□□ 1.77
Cacnb1Q8R3Z5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.11■■□□□ 1.77
Cacnb1Q8R3Z5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Cacnb1Q8R3Z5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.11■■□□□ 1.77
Cacnb1Q8R3Z5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cacnb1Q8R3Z5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Cacnb1Q8R3Z5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Cacnb1Q8R3Z5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Cacnb1Q8R3Z5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cacnb1Q8R3Z5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Cacnb1Q8R3Z5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Cacnb1Q8R3Z5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cacnb1Q8R3Z5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cacnb1Q8R3Z5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Cacnb1Q8R3Z5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Cacnb1Q8R3Z5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Cacnb1Q8R3Z5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Cacnb1Q8R3Z5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.05■■□□□ 1.76
Cacnb1Q8R3Z5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Cacnb1Q8R3Z5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.03■■□□□ 1.76
Cacnb1Q8R3Z5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Cacnb1Q8R3Z5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Cacnb1Q8R3Z5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Cacnb1Q8R3Z5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Cacnb1Q8R3Z5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cacnb1Q8R3Z5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Cacnb1Q8R3Z5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cacnb1Q8R3Z5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cacnb1Q8R3Z5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Cacnb1Q8R3Z5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Cacnb1Q8R3Z5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
Cacnb1Q8R3Z5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cacnb1Q8R3Z5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Cacnb1Q8R3Z5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Cacnb1Q8R3Z5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cacnb1Q8R3Z5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.92■■□□□ 1.74
Cacnb1Q8R3Z5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Cacnb1Q8R3Z5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Cacnb1Q8R3Z5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.91■■□□□ 1.74
Cacnb1Q8R3Z5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cacnb1Q8R3Z5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Cacnb1Q8R3Z5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.89■■□□□ 1.74
Cacnb1Q8R3Z5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Cacnb1Q8R3Z5 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.88■■□□□ 1.73
Cacnb1Q8R3Z5 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.88■■□□□ 1.73
Cacnb1Q8R3Z5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Cacnb1Q8R3Z5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cacnb1Q8R3Z5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Cacnb1Q8R3Z5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.86■■□□□ 1.73
Cacnb1Q8R3Z5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Cacnb1Q8R3Z5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Particl-201ENSMUST00000205370 1560 ntBASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cacnb1Q8R3Z5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cacnb1Q8R3Z5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.82■■□□□ 1.72
Cacnb1Q8R3Z5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.81■■□□□ 1.72
Cacnb1Q8R3Z5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.81■■□□□ 1.72
Cacnb1Q8R3Z5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cacnb1Q8R3Z5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Cacnb1Q8R3Z5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cacnb1Q8R3Z5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.79■■□□□ 1.72
Cacnb1Q8R3Z5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms