Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rtp1Q8C8C1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.67■■■□□ 2.02
Rtp1Q8C8C1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rtp1Q8C8C1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Rtp1Q8C8C1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtp1Q8C8C1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtp1Q8C8C1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtp1Q8C8C1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtp1Q8C8C1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtp1Q8C8C1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rtp1Q8C8C1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.6■■■□□ 2.01
Rtp1Q8C8C1 Gm22567-201ENSMUST00000175542 342 ntBASIC27.59■■■□□ 2.01
Rtp1Q8C8C1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtp1Q8C8C1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtp1Q8C8C1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.59■■■□□ 2.01
Rtp1Q8C8C1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtp1Q8C8C1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rtp1Q8C8C1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rtp1Q8C8C1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rtp1Q8C8C1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rtp1Q8C8C1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Rtp1Q8C8C1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.56■■■□□ 2
Rtp1Q8C8C1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.56■■■□□ 2
Rtp1Q8C8C1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.55■■■□□ 2
Rtp1Q8C8C1 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.55■■■□□ 2
Rtp1Q8C8C1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Rtp1Q8C8C1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rtp1Q8C8C1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Rtp1Q8C8C1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
Rtp1Q8C8C1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Rtp1Q8C8C1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtp1Q8C8C1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.5■■□□□ 1.99
Rtp1Q8C8C1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.49■■□□□ 1.99
Rtp1Q8C8C1 Mir3960-201ENSMUST00000198213 73 ntBASIC27.49■■□□□ 1.99
Rtp1Q8C8C1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Rtp1Q8C8C1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtp1Q8C8C1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rtp1Q8C8C1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rtp1Q8C8C1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rtp1Q8C8C1 Gm45364-201ENSMUST00000210883 159 ntBASIC27.47■■□□□ 1.99
Rtp1Q8C8C1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtp1Q8C8C1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.47■■□□□ 1.99
Rtp1Q8C8C1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtp1Q8C8C1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rtp1Q8C8C1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.98
Rtp1Q8C8C1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rtp1Q8C8C1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Rtp1Q8C8C1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
Rtp1Q8C8C1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Rtp1Q8C8C1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Rtp1Q8C8C1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Rtp1Q8C8C1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
Rtp1Q8C8C1 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.42■■□□□ 1.98
Rtp1Q8C8C1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rtp1Q8C8C1 Gm14523-201ENSMUST00000117260 558 ntBASIC27.41■■□□□ 1.98
Rtp1Q8C8C1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.41■■□□□ 1.98
Rtp1Q8C8C1 Gm5812-201ENSMUST00000061073 957 ntBASIC27.41■■□□□ 1.98
Rtp1Q8C8C1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Rtp1Q8C8C1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rtp1Q8C8C1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rtp1Q8C8C1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Rtp1Q8C8C1 Zxda-201ENSMUST00000117281 2621 ntBASIC27.39■■□□□ 1.98
Rtp1Q8C8C1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rtp1Q8C8C1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rtp1Q8C8C1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Rtp1Q8C8C1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rtp1Q8C8C1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rtp1Q8C8C1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Rtp1Q8C8C1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rtp1Q8C8C1 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.34■■□□□ 1.97
Rtp1Q8C8C1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.34■■□□□ 1.97
Rtp1Q8C8C1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rtp1Q8C8C1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rtp1Q8C8C1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
Rtp1Q8C8C1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rtp1Q8C8C1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Rtp1Q8C8C1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Rtp1Q8C8C1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Rtp1Q8C8C1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Rtp1Q8C8C1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtp1Q8C8C1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtp1Q8C8C1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rtp1Q8C8C1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtp1Q8C8C1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rtp1Q8C8C1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.3■■□□□ 1.96
Rtp1Q8C8C1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.3■■□□□ 1.96
Rtp1Q8C8C1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Rtp1Q8C8C1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rtp1Q8C8C1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.28■■□□□ 1.96
Rtp1Q8C8C1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rtp1Q8C8C1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rtp1Q8C8C1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Rtp1Q8C8C1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Rtp1Q8C8C1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rtp1Q8C8C1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.25■■□□□ 1.95
Rtp1Q8C8C1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rtp1Q8C8C1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Rtp1Q8C8C1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.23■■□□□ 1.95
Rtp1Q8C8C1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtp1Q8C8C1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms