RNA–Protein interactions for RNA: ENSMUST00000018755.9

Pdlim4-201, Transcript of PDZ and LIM domain protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim4, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4-201ENSMUST00000018755 Gm35339A0A140LHH9 1649 aa51.44■■■■■ 5.83
Pdlim4-201ENSMUST00000018755 NischQ80TM9 1593 aa50.69■■■■■ 5.71
Pdlim4-201ENSMUST00000018755 Abcc8B2RUS7 1588 aa49.07■■■■■ 5.45
Pdlim4-201ENSMUST00000018755 Abcc9P70170 1546 aa49.01■■■■■ 5.44
Pdlim4-201ENSMUST00000018755 ScribQ80U72 1612 aa47.38■■■■■ 5.18
Pdlim4-201ENSMUST00000018755 NacadQ5SWP3 1504 aa45.98■■■■■ 4.95
Pdlim4-201ENSMUST00000018755 Kdm5dQ62240 1548 aa45.8■■■■■ 4.92
Pdlim4-201ENSMUST00000018755 Dcaf1Q80TR8 1506 aa45.16■■■■■ 4.82
Pdlim4-201ENSMUST00000018755 Sycp2Q9CUU3 1500 aa45.07■■■■■ 4.81
Pdlim4-201ENSMUST00000018755 BicraF8VPZ9 1578 aa44.43■■■■■ 4.7
Pdlim4-201ENSMUST00000018755 Rb1cc1Q9ESK9 1588 aa44.14■■■■■ 4.66
Pdlim4-201ENSMUST00000018755 Rhox8Q6VSS7 320 aa43.58■■■■■ 4.57
Pdlim4-201ENSMUST00000018755 Dnajc5bQ9CQ94 199 aa43.53■■■■■ 4.56
Pdlim4-201ENSMUST00000018755 Baz1aO88379 1555 aa43.52■■■■■ 4.56
Pdlim4-201ENSMUST00000018755 Ccdc180J3QNE4 1664 aa43.52■■■■■ 4.56
Pdlim4-201ENSMUST00000018755 Crybg2B7ZCC2 1516 aa43.52■■■■■ 4.56
Pdlim4-201ENSMUST00000018755 Pds5bQ4VA53 1446 aaKnown RBP43.35■■■■■ 4.53
Pdlim4-201ENSMUST00000018755 Thoc2B1AZI6 1594 aaKnown RBP42.97■■■■■ 4.47
Pdlim4-201ENSMUST00000018755 Zcchc6Q5BLK4 1491 aaKnown RBP42.91■■■■■ 4.46
Pdlim4-201ENSMUST00000018755 Atad2bE9Q166 1460 aaKnown RBP42.87■■■■■ 4.45
Pdlim4-201ENSMUST00000018755 Ercc6F8VPZ5 1481 aa42.38■■■■■ 4.38
Pdlim4-201ENSMUST00000018755 Smarca4Q3TKT4 1613 aaKnown RBP42.38■■■■■ 4.37
Pdlim4-201ENSMUST00000018755 Smarca2Q6DIC0 1577 aa42.33■■■■■ 4.37
Pdlim4-201ENSMUST00000018755 Cc2d2aQ8CFW7 1633 aa42.27■■■■■ 4.36
Pdlim4-201ENSMUST00000018755 Iqgap2Q3UQ44 1575 aa42.17■■■■■ 4.34
Pdlim4-201ENSMUST00000018755 Cecr2E9Q2Z1 1453 aa42.15■■■■■ 4.34
Pdlim4-201ENSMUST00000018755 Fam135aQ6NS59 1506 aa41.98■■■■■ 4.31
Pdlim4-201ENSMUST00000018755 Wdr62Q3U3T8 1523 aa41.85■■■■■ 4.29
Pdlim4-201ENSMUST00000018755 Frmpd1A2AKB4 1549 aa41.81■■■■■ 4.28
Pdlim4-201ENSMUST00000018755 Phldb1Q6PDH0 1371 aaKnown RBP41.71■■■■■ 4.27
Pdlim4-201ENSMUST00000018755 Baz1bQ9Z277 1479 aa41.66■■■■■ 4.26
Pdlim4-201ENSMUST00000018755 Ubl4bQ9CQ84 188 aa41.33■■■■■ 4.21
Pdlim4-201ENSMUST00000018755 Rtl1Q7M732 1744 aa41.3■■■■■ 4.2
Pdlim4-201ENSMUST00000018755 CftrP26361 1476 aa41.21■■■■■ 4.19
Pdlim4-201ENSMUST00000018755 Cttnbp2B9EJA2 1648 aa41.15■■■■■ 4.18
Pdlim4-201ENSMUST00000018755 Unc13aQ4KUS2 1712 aa41.11■■■■■ 4.17
Pdlim4-201ENSMUST00000018755 Brd4Q9ESU6 1400 aaKnown RBP41.1■■■■■ 4.17
Pdlim4-201ENSMUST00000018755 Synj1Q8CHC4 1574 aa41.03■■■■■ 4.16
Pdlim4-201ENSMUST00000018755 Mrc2Q64449 1479 aa41.02■■■■■ 4.16
Pdlim4-201ENSMUST00000018755 Ccdc136Q3TVA9 1136 aa40.83■■■■■ 4.13
Pdlim4-201ENSMUST00000018755 Esf1Q3V1V3 845 aaKnown RBP40.52■■■■■ 4.08
Pdlim4-201ENSMUST00000018755 Rsf1E9PWW9 1441 aaKnown RBP40.36■■■■■ 4.05
Pdlim4-201ENSMUST00000018755 Trim41Q5NCC3 630 aa40.32■■■■■ 4.05
Pdlim4-201ENSMUST00000018755 Cux2P70298 1426 aa40.29■■■■■ 4.04
Pdlim4-201ENSMUST00000018755 Kif15Q6P9L6 1387 aa40.26■■■■■ 4.04
Pdlim4-201ENSMUST00000018755 Lrriq1Q0P5X1 1673 aa40.07■■■■■ 4
Pdlim4-201ENSMUST00000018755 Lamc3Q9R0B6 1581 aa40.06■■■■■ 4
Pdlim4-201ENSMUST00000018755 Kif21aQ9QXL2 1672 aa39.93■■■■□ 3.98
Pdlim4-201ENSMUST00000018755 Npm1Q61937 292 aaKnown RBP39.92■■■■□ 3.98
Pdlim4-201ENSMUST00000018755 Cep164Q5DU05 1446 aa39.74■■■■□ 3.95
Pdlim4-201ENSMUST00000018755 Dnajc5P60904 198 aa39.73■■■■□ 3.95
Pdlim4-201ENSMUST00000018755 Eif4g3Q80XI3 1579 aaKnown RBP39.54■■■■□ 3.92
Pdlim4-201ENSMUST00000018755 Ccdc18Q640L5 1455 aa39.53■■■■□ 3.92
Pdlim4-201ENSMUST00000018755 Golga3P55937 1487 aa39.52■■■■□ 3.92
Pdlim4-201ENSMUST00000018755 TnnQ80Z71 1560 aa39.51■■■■□ 3.92
Pdlim4-201ENSMUST00000018755 Top2bQ64511 1612 aa39.46■■■■□ 3.91
Pdlim4-201ENSMUST00000018755 Dhx29Q6PGC1 1365 aaKnown RBP39.43■■■■□ 3.9
Pdlim4-201ENSMUST00000018755 Il27Q8K3I6 234 aa39.38■■■■□ 3.89
Pdlim4-201ENSMUST00000018755 Urb2E9Q7L1 1524 aaKnown RBP39.36■■■■□ 3.89
Pdlim4-201ENSMUST00000018755 LrpprcQ6PB66 1392 aaKnown RBP39.35■■■■□ 3.89
Pdlim4-201ENSMUST00000018755 Cngb1E1AZ71 1325 aa39.33■■■■□ 3.89
Pdlim4-201ENSMUST00000018755 Plb1Q3TTY0 1478 aa39.3■■■■□ 3.88
Pdlim4-201ENSMUST00000018755 Camsap1A2AHC3 1581 aa39.28■■■■□ 3.88
Pdlim4-201ENSMUST00000018755 Shroom2A2ALU4 1481 aa39.24■■■■□ 3.87
Pdlim4-201ENSMUST00000018755 Crocc2F6XLV1 1638 aa39.2■■■■□ 3.87
Pdlim4-201ENSMUST00000018755 Fmn1Q05860 1466 aa39.14■■■■□ 3.86
Pdlim4-201ENSMUST00000018755 PogzQ8BZH4 1409 aaKnown RBP39.07■■■■□ 3.85
Pdlim4-201ENSMUST00000018755 Ift140E9PY46 1464 aa39.01■■■■□ 3.84
Pdlim4-201ENSMUST00000018755 Duox2A2AQ99 1517 aa38.89■■■■□ 3.82
Pdlim4-201ENSMUST00000018755 Rusc2Q80U22 1514 aa38.85■■■■□ 3.81
Pdlim4-201ENSMUST00000018755 Pabpn1Q8CCS6 302 aaKnown RBP38.85■■■■□ 3.81
Pdlim4-201ENSMUST00000018755 Grin2bQ01097 1482 aa38.76■■■■□ 3.8
Pdlim4-201ENSMUST00000018755 Col17a1Q07563 1470 aa38.7■■■■□ 3.79
Pdlim4-201ENSMUST00000018755 Disp1Q3TDN0 1521 aa38.66■■■■□ 3.78
Pdlim4-201ENSMUST00000018755 Efcab5A0JP43 1406 aa38.61■■■■□ 3.77
Pdlim4-201ENSMUST00000018755 Pelp1Q9DBD5 1123 aaKnown RBP38.52■■■■□ 3.76
Pdlim4-201ENSMUST00000018755 Cc2d2bA0A286YDU8 1405 aa38.52■■■■□ 3.76
Pdlim4-201ENSMUST00000018755 Nup160Q9Z0W3 1402 aaKnown RBP38.51■■■■□ 3.76
Pdlim4-201ENSMUST00000018755 Pbrm1Q8BSQ9 1634 aaKnown RBP38.51■■■■□ 3.76
Pdlim4-201ENSMUST00000018755 Samd9lQ69Z37 1561 aa38.49■■■■□ 3.75
Pdlim4-201ENSMUST00000018755 Setd1bQ8CFT2 1985 aa38.34■■■■□ 3.73
Pdlim4-201ENSMUST00000018755 Ccdc88bQ4QRL3 1481 aa38.34■■■■□ 3.73
Pdlim4-201ENSMUST00000018755 Zcchc11B2RX14 1644 aaKnown RBP38.33■■■■□ 3.73
Pdlim4-201ENSMUST00000018755 NrkQ9R0G8 1455 aa38.32■■■■□ 3.72
Pdlim4-201ENSMUST00000018755 Top2aQ01320 1528 aaKnown RBP38.29■■■■□ 3.72
Pdlim4-201ENSMUST00000018755 Rad54l2Q99NG0 1466 aa38.27■■■■□ 3.72
Pdlim4-201ENSMUST00000018755 Grin2aP35436 1464 aa38.23■■■■□ 3.71
Pdlim4-201ENSMUST00000018755 AqrQ8CFQ3 1481 aaKnown RBP38.19■■■■□ 3.7
Pdlim4-201ENSMUST00000018755 Magi3Q9EQJ9 1476 aa38.19■■■■□ 3.7
Pdlim4-201ENSMUST00000018755 Fgd6Q69ZL1 1399 aa38.13■■■■□ 3.69
Pdlim4-201ENSMUST00000018755 Shroom4Q1W617 1475 aa38.09■■■■□ 3.69
Pdlim4-201ENSMUST00000018755 Chic1Q8CBW7 227 aa38.05■■■■□ 3.68
Pdlim4-201ENSMUST00000018755 PtprkP35822 1457 aa38.01■■■■□ 3.67
Pdlim4-201ENSMUST00000018755 Gpatch8A2A6A1 1505 aa37.97■■■■□ 3.67
Pdlim4-201ENSMUST00000018755 SynmQ70IV5 1561 aa37.95■■■■□ 3.67
Pdlim4-201ENSMUST00000018755 Pla2r1Q62028 1487 aa37.93■■■■□ 3.66
Pdlim4-201ENSMUST00000018755 Adgrl3Q80TS3 1537 aa37.87■■■■□ 3.65
Pdlim4-201ENSMUST00000018755 Gapvd1Q6PAR5 1458 aa37.84■■■■□ 3.65
Pdlim4-201ENSMUST00000018755 Cep170Q6A065 1588 aa37.81■■■■□ 3.64
Pdlim4-201ENSMUST00000018755 Zeb1Q64318 1117 aa37.8■■■■□ 3.64
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms