Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 ELP4YPL101W 1371 nt8.53□□□□□ -1.04
DNL4Q08387 OLA1YBR025C 1185 nt8.53□□□□□ -1.04
DNL4Q08387 RTG2YGL252C 1767 nt8.53□□□□□ -1.04
DNL4Q08387 MFG1YDL233W 1377 nt8.52□□□□□ -1.05
DNL4Q08387 KAE1YKR038C 1161 nt8.52□□□□□ -1.05
DNL4Q08387 MET22YOL064C 1074 nt8.52□□□□□ -1.05
DNL4Q08387 GGA2YHR108W 1758 nt8.52□□□□□ -1.05
DNL4Q08387 FIT1YDR534C 1587 nt8.51□□□□□ -1.05
DNL4Q08387 RPS6AYPL090C 711 nt8.5□□□□□ -1.05
DNL4Q08387 RPS6BYBR181C 711 nt8.5□□□□□ -1.05
DNL4Q08387 YJR149WYJR149W 1215 nt8.49□□□□□ -1.05
DNL4Q08387 YMR316C-BYMR316C-B 309 nt8.49□□□□□ -1.05
DNL4Q08387 YLR173WYLR173W 1827 nt8.49□□□□□ -1.05
DNL4Q08387 DPL1YDR294C 1770 nt8.48□□□□□ -1.05
DNL4Q08387 YMR206WYMR206W 942 nt8.48□□□□□ -1.05
DNL4Q08387 BXI1YNL305C 894 nt8.48□□□□□ -1.05
DNL4Q08387 PDC6YGR087C 1692 nt8.48□□□□□ -1.05
DNL4Q08387 THI3YDL080C 1830 nt8.47□□□□□ -1.05
DNL4Q08387 DUR3YHL016C 2208 nt8.46□□□□□ -1.05
DNL4Q08387 YIR035CYIR035C 765 nt8.46□□□□□ -1.06
DNL4Q08387 GPM1YKL152C 744 nt8.46□□□□□ -1.06
DNL4Q08387 GCD11YER025W 1584 nt8.46□□□□□ -1.06
DNL4Q08387 TOS1YBR162C 1368 nt8.46□□□□□ -1.06
DNL4Q08387 YPT31YER031C 672 nt8.45□□□□□ -1.06
DNL4Q08387 TDH1YJL052W 999 nt8.45□□□□□ -1.06
DNL4Q08387 MDM35YKL053C-A 261 nt8.45□□□□□ -1.06
DNL4Q08387 ADE1YAR015W 921 nt8.45□□□□□ -1.06
DNL4Q08387 YDR467CYDR467C 327 nt8.44□□□□□ -1.06
DNL4Q08387 RNA170RNA170 169 nt8.43□□□□□ -1.06
DNL4Q08387 MET30YIL046W 1923 nt8.42□□□□□ -1.06
DNL4Q08387 YJL043WYJL043W 774 nt8.42□□□□□ -1.06
DNL4Q08387 HOG1YLR113W 1308 nt8.41□□□□□ -1.06
DNL4Q08387 FUS3YBL016W 1062 nt8.41□□□□□ -1.06
DNL4Q08387 HXT10YFL011W 1641 nt8.4□□□□□ -1.06
DNL4Q08387 ATP2YJR121W 1536 nt8.4□□□□□ -1.06
DNL4Q08387 TMS1YDR105C 1422 nt8.4□□□□□ -1.06
DNL4Q08387 RHO1YPR165W 630 nt8.4□□□□□ -1.06
DNL4Q08387 ECM10YEL030W 1935 nt8.4□□□□□ -1.06
DNL4Q08387 PET494YNR045W 1470 nt8.39□□□□□ -1.07
DNL4Q08387 NUP53YMR153W 1428 nt8.39□□□□□ -1.07
DNL4Q08387 BUB2YMR055C 921 nt8.39□□□□□ -1.07
DNL4Q08387 AAC3YBR085W 924 nt8.39□□□□□ -1.07
DNL4Q08387 LEU4YNL104C 1860 nt8.38□□□□□ -1.07
DNL4Q08387 PRE5YMR314W 705 nt8.38□□□□□ -1.07
DNL4Q08387 YBL095WYBL095W 813 nt8.38□□□□□ -1.07
DNL4Q08387 NBA1YOL070C 1506 nt8.38□□□□□ -1.07
DNL4Q08387 BAP3YDR046C 1815 nt8.38□□□□□ -1.07
DNL4Q08387 YNL190WYNL190W 615 nt8.36□□□□□ -1.07
DNL4Q08387 YRF1-2YER190W 5046 nt8.36□□□□□ -1.07
DNL4Q08387 YIL168WYIL168W 384 nt8.35□□□□□ -1.07
DNL4Q08387 YMC2YBR104W 990 nt8.35□□□□□ -1.07
DNL4Q08387 SDH8YBR269C 417 nt8.35□□□□□ -1.07
DNL4Q08387 THI73YLR004C 1572 nt8.35□□□□□ -1.07
DNL4Q08387 INH1YDL181W 258 nt8.34□□□□□ -1.07
DNL4Q08387 tE(CUC)DtE(CUC)D 72 nt8.34□□□□□ -1.07
DNL4Q08387 tE(CUC)ItE(CUC)I 72 nt8.34□□□□□ -1.07
DNL4Q08387 PUP3YER094C 618 nt8.34□□□□□ -1.07
DNL4Q08387 YJL009WYJL009W 327 nt8.34□□□□□ -1.07
DNL4Q08387 MRS4YKR052C 915 nt8.34□□□□□ -1.07
DNL4Q08387 MIM1YOL026C 342 nt8.34□□□□□ -1.07
DNL4Q08387 ADE5,7YGL234W 2409 nt8.34□□□□□ -1.07
DNL4Q08387 YDR476CYDR476C 675 nt8.31□□□□□ -1.08
DNL4Q08387 LAS17YOR181W 1902 nt8.31□□□□□ -1.08
DNL4Q08387 PMU1YKL128C 888 nt8.3□□□□□ -1.08
DNL4Q08387 tD(GUC)BtD(GUC)B 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)DtD(GUC)D 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)G1tD(GUC)G1 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)G2tD(GUC)G2 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)I1tD(GUC)I1 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)I2tD(GUC)I2 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)J1tD(GUC)J1 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)J2tD(GUC)J2 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)J3tD(GUC)J3 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)J4tD(GUC)J4 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)KtD(GUC)K 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)L1tD(GUC)L1 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)L2tD(GUC)L2 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)MtD(GUC)M 72 nt8.29□□□□□ -1.08
DNL4Q08387 tD(GUC)OtD(GUC)O 72 nt8.29□□□□□ -1.08
DNL4Q08387 YBR056WYBR056W 1506 nt8.29□□□□□ -1.08
DNL4Q08387 SHC1YER096W 1539 nt8.28□□□□□ -1.08
DNL4Q08387 DUS3YLR401C 2007 nt8.27□□□□□ -1.09
DNL4Q08387 ADE2YOR128C 1716 nt8.26□□□□□ -1.09
DNL4Q08387 PRE10YOR362C 867 nt8.26□□□□□ -1.09
DNL4Q08387 TIM50YPL063W 1431 nt8.26□□□□□ -1.09
DNL4Q08387 PSP2YML017W 1782 nt8.25□□□□□ -1.09
DNL4Q08387 AGP3YFL055W 1677 nt8.25□□□□□ -1.09
DNL4Q08387 NDE1YMR145C 1683 nt8.25□□□□□ -1.09
DNL4Q08387 RRT6YGL146C 936 nt8.25□□□□□ -1.09
DNL4Q08387 YPL247CYPL247C 1572 nt8.25□□□□□ -1.09
DNL4Q08387 JHD1YER051W 1479 nt8.25□□□□□ -1.09
DNL4Q08387 MAM3YOL060C 2121 nt8.23□□□□□ -1.09
DNL4Q08387 HAC1YFL031W 717 nt8.23□□□□□ -1.09
DNL4Q08387 FRT1YOR324C 1809 nt8.23□□□□□ -1.09
DNL4Q08387 NPP2YEL016C 1482 nt8.22□□□□□ -1.09
DNL4Q08387 YHL030W-AYHL030W-A 462 nt8.22□□□□□ -1.09
DNL4Q08387 YLR358CYLR358C 564 nt8.22□□□□□ -1.09
DNL4Q08387 BEM1YBR200W 1656 nt8.21□□□□□ -1.09
DNL4Q08387 MEP1YGR121C 1479 nt8.21□□□□□ -1.09
DNL4Q08387 SNU66YOR308C 1764 nt8.21□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms