Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 EMC3YKL207W 762 nt9.47□□□□□ -0.89
BRE1Q07457 PDC6YGR087C 1692 nt9.47□□□□□ -0.89
BRE1Q07457 NBA1YOL070C 1506 nt9.46□□□□□ -0.89
BRE1Q07457 YBR056WYBR056W 1506 nt9.46□□□□□ -0.89
BRE1Q07457 PET18YCR020C 648 nt9.46□□□□□ -0.9
BRE1Q07457 MEP1YGR121C 1479 nt9.46□□□□□ -0.9
BRE1Q07457 FET5YFL041W 1869 nt9.45□□□□□ -0.9
BRE1Q07457 THI6YPL214C 1623 nt9.45□□□□□ -0.9
BRE1Q07457 YMR210WYMR210W 1350 nt9.44□□□□□ -0.9
BRE1Q07457 YHL008CYHL008C 1884 nt9.42□□□□□ -0.9
BRE1Q07457 RHO1YPR165W 630 nt9.41□□□□□ -0.9
BRE1Q07457 YPT31YER031C 672 nt9.38□□□□□ -0.91
BRE1Q07457 HXT11YOL156W 1704 nt9.38□□□□□ -0.91
BRE1Q07457 BXI1YNL305C 894 nt9.37□□□□□ -0.91
BRE1Q07457 RPS6AYPL090C 711 nt9.37□□□□□ -0.91
BRE1Q07457 RPS6BYBR181C 711 nt9.37□□□□□ -0.91
BRE1Q07457 THI73YLR004C 1572 nt9.37□□□□□ -0.91
BRE1Q07457 YHR131CYHR131C 2553 nt9.36□□□□□ -0.91
BRE1Q07457 YLR072WYLR072W 2082 nt9.36□□□□□ -0.91
BRE1Q07457 ADE2YOR128C 1716 nt9.36□□□□□ -0.91
BRE1Q07457 POP2YNR052C 1302 nt9.35□□□□□ -0.91
BRE1Q07457 UTR5YEL035C 501 nt9.35□□□□□ -0.91
BRE1Q07457 YER156CYER156C 1017 nt9.35□□□□□ -0.91
BRE1Q07457 MFT1YML062C 1179 nt9.35□□□□□ -0.91
BRE1Q07457 YER152W-AYER152W-A 567 nt9.34□□□□□ -0.91
BRE1Q07457 SHC1YER096W 1539 nt9.34□□□□□ -0.91
BRE1Q07457 YPR084WYPR084W 1371 nt9.34□□□□□ -0.91
BRE1Q07457 PUP3YER094C 618 nt9.33□□□□□ -0.92
BRE1Q07457 EHT1YBR177C 1356 nt9.33□□□□□ -0.92
BRE1Q07457 YMR206WYMR206W 942 nt9.32□□□□□ -0.92
BRE1Q07457 LRO1YNR008W 1986 nt9.32□□□□□ -0.92
BRE1Q07457 ECM27YJR106W 2178 nt9.31□□□□□ -0.92
BRE1Q07457 SRM1YGL097W 1449 nt9.31□□□□□ -0.92
BRE1Q07457 GRH1YDR517W 1119 nt9.31□□□□□ -0.92
BRE1Q07457 HIS3YOR202W 663 nt9.31□□□□□ -0.92
BRE1Q07457 RTG2YGL252C 1767 nt9.3□□□□□ -0.92
BRE1Q07457 LEA1YPL213W 717 nt9.3□□□□□ -0.92
BRE1Q07457 INO1YJL153C 1602 nt9.3□□□□□ -0.92
BRE1Q07457 tD(GUC)BtD(GUC)B 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)DtD(GUC)D 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)G1tD(GUC)G1 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)G2tD(GUC)G2 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)I1tD(GUC)I1 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)I2tD(GUC)I2 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)J1tD(GUC)J1 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)J2tD(GUC)J2 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)J3tD(GUC)J3 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)J4tD(GUC)J4 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)KtD(GUC)K 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)L1tD(GUC)L1 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)L2tD(GUC)L2 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)MtD(GUC)M 72 nt9.29□□□□□ -0.92
BRE1Q07457 tD(GUC)OtD(GUC)O 72 nt9.29□□□□□ -0.92
BRE1Q07457 TOM71YHR117W 1920 nt9.29□□□□□ -0.92
BRE1Q07457 ABP1YCR088W 1779 nt9.28□□□□□ -0.92
BRE1Q07457 ADA2YDR448W 1305 nt9.28□□□□□ -0.92
BRE1Q07457 CBK1YNL161W 2271 nt9.28□□□□□ -0.92
BRE1Q07457 BUD31YCR063W 474 nt9.27□□□□□ -0.93
BRE1Q07457 YHL030W-AYHL030W-A 462 nt9.27□□□□□ -0.93
BRE1Q07457 NDE2YDL085W 1638 nt9.27□□□□□ -0.93
BRE1Q07457 RCF1YML030W 480 nt9.26□□□□□ -0.93
BRE1Q07457 PAU21YOR394W 495 nt9.26□□□□□ -0.93
BRE1Q07457 PAU22YPL282C 495 nt9.26□□□□□ -0.93
BRE1Q07457 ATP2YJR121W 1536 nt9.26□□□□□ -0.93
BRE1Q07457 HXT8YJL214W 1710 nt9.25□□□□□ -0.93
BRE1Q07457 MRP1YDR347W 966 nt9.24□□□□□ -0.93
BRE1Q07457 YJL045WYJL045W 1905 nt9.24□□□□□ -0.93
BRE1Q07457 GDH1YOR375C 1365 nt9.24□□□□□ -0.93
BRE1Q07457 BUD20YLR074C 501 nt9.23□□□□□ -0.93
BRE1Q07457 PRE10YOR362C 867 nt9.23□□□□□ -0.93
BRE1Q07457 DIP5YPL265W 1827 nt9.23□□□□□ -0.93
BRE1Q07457 TIM50YPL063W 1431 nt9.22□□□□□ -0.93
BRE1Q07457 HRA1HRA1 564 nt9.22□□□□□ -0.93
BRE1Q07457 YEL023CYEL023C 2049 nt9.22□□□□□ -0.93
BRE1Q07457 JHD1YER051W 1479 nt9.21□□□□□ -0.93
BRE1Q07457 YIL168WYIL168W 384 nt9.21□□□□□ -0.94
BRE1Q07457 MIM1YOL026C 342 nt9.21□□□□□ -0.94
BRE1Q07457 ELP4YPL101W 1371 nt9.21□□□□□ -0.94
BRE1Q07457 FTH1YBR207W 1398 nt9.21□□□□□ -0.94
BRE1Q07457 TAD2YJL035C 753 nt9.2□□□□□ -0.94
BRE1Q07457 TDA4YJR116W 840 nt9.2□□□□□ -0.94
BRE1Q07457 GCD11YER025W 1584 nt9.2□□□□□ -0.94
BRE1Q07457 WSC3YOL105C 1671 nt9.2□□□□□ -0.94
BRE1Q07457 TGL5YOR081C 2250 nt9.19□□□□□ -0.94
BRE1Q07457 YGR137WYGR137W 375 nt9.19□□□□□ -0.94
BRE1Q07457 TDH1YJL052W 999 nt9.19□□□□□ -0.94
BRE1Q07457 PMU1YKL128C 888 nt9.19□□□□□ -0.94
BRE1Q07457 YOR343CYOR343C 327 nt9.19□□□□□ -0.94
BRE1Q07457 MAM3YOL060C 2121 nt9.19□□□□□ -0.94
BRE1Q07457 GLY1YEL046C 1164 nt9.18□□□□□ -0.94
BRE1Q07457 ORT1YOR130C 879 nt9.18□□□□□ -0.94
BRE1Q07457 TIF3YPR163C 1311 nt9.17□□□□□ -0.94
BRE1Q07457 YNL140CYNL140C 570 nt9.17□□□□□ -0.94
BRE1Q07457 DUR3YHL016C 2208 nt9.17□□□□□ -0.94
BRE1Q07457 HBS1YKR084C 1836 nt9.17□□□□□ -0.94
BRE1Q07457 YRF1-3YGR296W 5580 nt9.16□□□□□ -0.94
BRE1Q07457 YRF1-6YNL339C 5580 nt9.16□□□□□ -0.94
BRE1Q07457 YRF1-7YPL283C 5580 nt9.16□□□□□ -0.94
BRE1Q07457 ARO3YDR035W 1113 nt9.16□□□□□ -0.94
BRE1Q07457 INM1YHR046C 888 nt9.16□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms