Protein–RNA interactions for Protein: Q04214

TY1B-MR1, Transposon Ty1-MR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-MR1Q04214 PNS1YOR161C 1620 nt11.99□□□□□ -0.49
TY1B-MR1Q04214 PSP2YML017W 1782 nt11.99□□□□□ -0.49
TY1B-MR1Q04214 PUP3YER094C 618 nt11.99□□□□□ -0.49
TY1B-MR1Q04214 MUP1YGR055W 1725 nt11.96□□□□□ -0.49
TY1B-MR1Q04214 RPD3YNL330C 1302 nt11.96□□□□□ -0.5
TY1B-MR1Q04214 YBL111CYBL111C 2004 nt11.95□□□□□ -0.5
TY1B-MR1Q04214 CPT1YNL130C 1182 nt11.95□□□□□ -0.5
TY1B-MR1Q04214 MCH5YOR306C 1566 nt11.94□□□□□ -0.5
TY1B-MR1Q04214 MEP1YGR121C 1479 nt11.91□□□□□ -0.5
TY1B-MR1Q04214 GGA2YHR108W 1758 nt11.91□□□□□ -0.5
TY1B-MR1Q04214 ZIM17YNL310C 525 nt11.9□□□□□ -0.51
TY1B-MR1Q04214 CST26YBR042C 1194 nt11.9□□□□□ -0.51
TY1B-MR1Q04214 JHD1YER051W 1479 nt11.89□□□□□ -0.51
TY1B-MR1Q04214 GPM1YKL152C 744 nt11.89□□□□□ -0.51
TY1B-MR1Q04214 SGA1YIL099W 1650 nt11.89□□□□□ -0.51
TY1B-MR1Q04214 AVO2YMR068W 1281 nt11.88□□□□□ -0.51
TY1B-MR1Q04214 RPC31YNL151C 756 nt11.87□□□□□ -0.51
TY1B-MR1Q04214 AAC3YBR085W 924 nt11.87□□□□□ -0.51
TY1B-MR1Q04214 ADH6YMR318C 1083 nt11.85□□□□□ -0.51
TY1B-MR1Q04214 HXT8YJL214W 1710 nt11.84□□□□□ -0.51
TY1B-MR1Q04214 TIM50YPL063W 1431 nt11.83□□□□□ -0.52
TY1B-MR1Q04214 GAL83YER027C 1254 nt11.82□□□□□ -0.52
TY1B-MR1Q04214 SPT20YOL148C 1815 nt11.8□□□□□ -0.52
TY1B-MR1Q04214 ZAP1YJL056C 2643 nt11.8□□□□□ -0.52
TY1B-MR1Q04214 YIR035CYIR035C 765 nt11.8□□□□□ -0.52
TY1B-MR1Q04214 YJL009WYJL009W 327 nt11.8□□□□□ -0.52
TY1B-MR1Q04214 TMS1YDR105C 1422 nt11.8□□□□□ -0.52
TY1B-MR1Q04214 YPQ1YOL092W 927 nt11.79□□□□□ -0.52
TY1B-MR1Q04214 PMP3YDR276C 168 nt11.78□□□□□ -0.52
TY1B-MR1Q04214 HOL1YNR055C 1761 nt11.78□□□□□ -0.52
TY1B-MR1Q04214 SSL2YIL143C 2532 nt11.76□□□□□ -0.53
TY1B-MR1Q04214 UGP1YKL035W 1500 nt11.76□□□□□ -0.53
TY1B-MR1Q04214 AIM46YHR199C 933 nt11.76□□□□□ -0.53
TY1B-MR1Q04214 YDR510C-AYDR510C-A 117 nt11.75□□□□□ -0.53
TY1B-MR1Q04214 TRR2YHR106W 1029 nt11.75□□□□□ -0.53
TY1B-MR1Q04214 CRN1YLR429W 1956 nt11.74□□□□□ -0.53
TY1B-MR1Q04214 PDA1YER178W 1263 nt11.74□□□□□ -0.53
TY1B-MR1Q04214 PLB3YOL011W 2061 nt11.74□□□□□ -0.53
TY1B-MR1Q04214 MBF1YOR298C-A 456 nt11.73□□□□□ -0.53
TY1B-MR1Q04214 DPL1YDR294C 1770 nt11.72□□□□□ -0.53
TY1B-MR1Q04214 YDR467CYDR467C 327 nt11.71□□□□□ -0.54
TY1B-MR1Q04214 PRE10YOR362C 867 nt11.71□□□□□ -0.54
TY1B-MR1Q04214 CWP2YKL096W-A 279 nt11.69□□□□□ -0.54
TY1B-MR1Q04214 BUB2YMR055C 921 nt11.69□□□□□ -0.54
TY1B-MR1Q04214 POR2YIL114C 846 nt11.68□□□□□ -0.54
TY1B-MR1Q04214 YHR218WYHR218W 1812 nt11.68□□□□□ -0.54
TY1B-MR1Q04214 YML034C-AYML034C-A 399 nt11.67□□□□□ -0.54
TY1B-MR1Q04214 MCP1YOR228C 909 nt11.67□□□□□ -0.54
TY1B-MR1Q04214 ODC1YPL134C 933 nt11.67□□□□□ -0.54
TY1B-MR1Q04214 YMC2YBR104W 990 nt11.67□□□□□ -0.54
TY1B-MR1Q04214 PMU1YKL128C 888 nt11.67□□□□□ -0.54
TY1B-MR1Q04214 LDB7YBL006C 543 nt11.67□□□□□ -0.54
TY1B-MR1Q04214 YBR056WYBR056W 1506 nt11.66□□□□□ -0.54
TY1B-MR1Q04214 CKI1YLR133W 1749 nt11.64□□□□□ -0.55
TY1B-MR1Q04214 YGL081WYGL081W 963 nt11.64□□□□□ -0.55
TY1B-MR1Q04214 NMA2YGR010W 1188 nt11.64□□□□□ -0.55
TY1B-MR1Q04214 CDC3YLR314C 1563 nt11.64□□□□□ -0.55
TY1B-MR1Q04214 BIO3YNR058W 1443 nt11.63□□□□□ -0.55
TY1B-MR1Q04214 YJR142WYJR142W 1029 nt11.63□□□□□ -0.55
TY1B-MR1Q04214 PTH2YBL057C 627 nt11.63□□□□□ -0.55
TY1B-MR1Q04214 LEU4YNL104C 1860 nt11.62□□□□□ -0.55
TY1B-MR1Q04214 MPH3YJR160C 1809 nt11.62□□□□□ -0.55
TY1B-MR1Q04214 MRS4YKR052C 915 nt11.62□□□□□ -0.55
TY1B-MR1Q04214 LRO1YNR008W 1986 nt11.61□□□□□ -0.55
TY1B-MR1Q04214 ARO3YDR035W 1113 nt11.6□□□□□ -0.55
TY1B-MR1Q04214 tE(CUC)DtE(CUC)D 72 nt11.59□□□□□ -0.55
TY1B-MR1Q04214 tE(CUC)ItE(CUC)I 72 nt11.59□□□□□ -0.55
TY1B-MR1Q04214 SPS1YDR523C 1473 nt11.59□□□□□ -0.55
TY1B-MR1Q04214 ARG7YMR062C 1326 nt11.58□□□□□ -0.55
TY1B-MR1Q04214 PSA1YDL055C 1086 nt11.58□□□□□ -0.56
TY1B-MR1Q04214 AIM20YIL158W 615 nt11.58□□□□□ -0.56
TY1B-MR1Q04214 ERV2YPR037C 591 nt11.58□□□□□ -0.56
TY1B-MR1Q04214 YER152CYER152C 1332 nt11.57□□□□□ -0.56
TY1B-MR1Q04214 YPL067CYPL067C 597 nt11.56□□□□□ -0.56
TY1B-MR1Q04214 ALG7YBR243C 1347 nt11.56□□□□□ -0.56
TY1B-MR1Q04214 LGE1YPL055C 999 nt11.55□□□□□ -0.56
TY1B-MR1Q04214 snR86snR86 1004 nt11.54□□□□□ -0.56
TY1B-MR1Q04214 PRS4YBL068W 981 nt11.54□□□□□ -0.56
TY1B-MR1Q04214 TPN1YGL186C 1740 nt11.54□□□□□ -0.56
TY1B-MR1Q04214 OSM1YJR051W 1506 nt11.54□□□□□ -0.56
TY1B-MR1Q04214 YLR184WYLR184W 348 nt11.53□□□□□ -0.56
TY1B-MR1Q04214 AAT1YKL106W 1356 nt11.52□□□□□ -0.56
TY1B-MR1Q04214 TES1YJR019C 1050 nt11.51□□□□□ -0.57
TY1B-MR1Q04214 CYS4YGR155W 1524 nt11.51□□□□□ -0.57
TY1B-MR1Q04214 MDM35YKL053C-A 261 nt11.49□□□□□ -0.57
TY1B-MR1Q04214 AGP3YFL055W 1677 nt11.49□□□□□ -0.57
TY1B-MR1Q04214 BUD31YCR063W 474 nt11.49□□□□□ -0.57
TY1B-MR1Q04214 RCF1YML030W 480 nt11.49□□□□□ -0.57
TY1B-MR1Q04214 EHT1YBR177C 1356 nt11.48□□□□□ -0.57
TY1B-MR1Q04214 AAD14YNL331C 1131 nt11.47□□□□□ -0.57
TY1B-MR1Q04214 MSI1YBR195C 1269 nt11.47□□□□□ -0.57
TY1B-MR1Q04214 DIP5YPL265W 1827 nt11.47□□□□□ -0.57
TY1B-MR1Q04214 STS1YIR011C 960 nt11.43□□□□□ -0.58
TY1B-MR1Q04214 IMD1YAR073W 1212 nt11.43□□□□□ -0.58
TY1B-MR1Q04214 ERG10YPL028W 1197 nt11.42□□□□□ -0.58
TY1B-MR1Q04214 NPP2YEL016C 1482 nt11.42□□□□□ -0.58
TY1B-MR1Q04214 SUN4YNL066W 1263 nt11.41□□□□□ -0.58
TY1B-MR1Q04214 MDH1YKL085W 1005 nt11.41□□□□□ -0.58
TY1B-MR1Q04214 DPM1YPR183W 804 nt11.41□□□□□ -0.58
TY1B-MR1Q04214 snR30snR30 606 nt11.41□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 42.4 ms