Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Cxcr4P70658 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cxcr4P70658 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Cxcr4P70658 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cxcr4P70658 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cxcr4P70658 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cxcr4P70658 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Cxcr4P70658 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cxcr4P70658 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cxcr4P70658 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cxcr4P70658 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.97■■□□□ 1.11
Cxcr4P70658 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cxcr4P70658 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cxcr4P70658 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcr4P70658 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcr4P70658 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcr4P70658 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cxcr4P70658 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cxcr4P70658 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cxcr4P70658 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cxcr4P70658 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cxcr4P70658 Gm6821-201ENSMUST00000107540 542 ntBASIC21.93■■□□□ 1.1
Cxcr4P70658 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cxcr4P70658 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cxcr4P70658 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.92■■□□□ 1.1
Cxcr4P70658 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcr4P70658 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cxcr4P70658 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcr4P70658 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcr4P70658 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cxcr4P70658 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Cxcr4P70658 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
Cxcr4P70658 Gm8503-201ENSMUST00000118131 455 ntBASIC21.89■■□□□ 1.09
Cxcr4P70658 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cxcr4P70658 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cxcr4P70658 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cxcr4P70658 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cxcr4P70658 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cxcr4P70658 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cxcr4P70658 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.87■■□□□ 1.09
Cxcr4P70658 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cxcr4P70658 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cxcr4P70658 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cxcr4P70658 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cxcr4P70658 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cxcr4P70658 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Cxcr4P70658 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.85■■□□□ 1.09
Cxcr4P70658 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Cxcr4P70658 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cxcr4P70658 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cxcr4P70658 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cxcr4P70658 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cxcr4P70658 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cxcr4P70658 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cxcr4P70658 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cxcr4P70658 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.83■■□□□ 1.09
Cxcr4P70658 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Cxcr4P70658 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cxcr4P70658 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cxcr4P70658 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cxcr4P70658 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cxcr4P70658 Nkain2-201ENSMUST00000092602 558 ntBASIC21.82■■□□□ 1.08
Cxcr4P70658 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cxcr4P70658 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cxcr4P70658 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cxcr4P70658 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Cxcr4P70658 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.79■■□□□ 1.08
Cxcr4P70658 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cxcr4P70658 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cxcr4P70658 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cxcr4P70658 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cxcr4P70658 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cxcr4P70658 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cxcr4P70658 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cxcr4P70658 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.76■■□□□ 1.07
Cxcr4P70658 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.76■■□□□ 1.07
Cxcr4P70658 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cxcr4P70658 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Cxcr4P70658 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cxcr4P70658 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.75■■□□□ 1.07
Cxcr4P70658 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cxcr4P70658 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cxcr4P70658 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cxcr4P70658 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cxcr4P70658 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cxcr4P70658 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cxcr4P70658 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cxcr4P70658 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cxcr4P70658 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cxcr4P70658 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cxcr4P70658 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcr4P70658 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcr4P70658 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cxcr4P70658 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms