Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 SRP102YKL154W 735 nt7.1□□□□□ -1.27
LSM4P40070 YMR253CYMR253C 1245 nt7.1□□□□□ -1.27
LSM4P40070 YPL247CYPL247C 1572 nt7.1□□□□□ -1.27
LSM4P40070 YRF1-3YGR296W 5580 nt7.09□□□□□ -1.27
LSM4P40070 YRF1-6YNL339C 5580 nt7.09□□□□□ -1.27
LSM4P40070 YRF1-7YPL283C 5580 nt7.09□□□□□ -1.27
LSM4P40070 YMR210WYMR210W 1350 nt7.09□□□□□ -1.27
LSM4P40070 ABZ2YMR289W 1125 nt7.09□□□□□ -1.27
LSM4P40070 ATO2YNR002C 849 nt7.09□□□□□ -1.27
LSM4P40070 MAM3YOL060C 2121 nt7.09□□□□□ -1.28
LSM4P40070 YNL040WYNL040W 1371 nt7.08□□□□□ -1.28
LSM4P40070 YGR210CYGR210C 1236 nt7.08□□□□□ -1.28
LSM4P40070 PMT7YDR307W 1989 nt7.08□□□□□ -1.28
LSM4P40070 GNP1YDR508C 1992 nt7.08□□□□□ -1.28
LSM4P40070 AFG2YLR397C 2343 nt7.07□□□□□ -1.28
LSM4P40070 ADE2YOR128C 1716 nt7.07□□□□□ -1.28
LSM4P40070 YJL160CYJL160C 864 nt7.07□□□□□ -1.28
LSM4P40070 YPL264CYPL264C 1062 nt7.07□□□□□ -1.28
LSM4P40070 CCR4YAL021C 2514 nt7.06□□□□□ -1.28
LSM4P40070 OSH7YHR001W 1314 nt7.06□□□□□ -1.28
LSM4P40070 tL(UAA)B1tL(UAA)B1 84 nt7.06□□□□□ -1.28
LSM4P40070 tL(UAA)B2tL(UAA)B2 84 nt7.06□□□□□ -1.28
LSM4P40070 tL(UAA)DtL(UAA)D 84 nt7.06□□□□□ -1.28
LSM4P40070 SUP51tL(UAA)J 84 nt7.06□□□□□ -1.28
LSM4P40070 tL(UAA)KtL(UAA)K 84 nt7.06□□□□□ -1.28
LSM4P40070 tL(UAA)LtL(UAA)L 84 nt7.06□□□□□ -1.28
LSM4P40070 tL(UAA)NtL(UAA)N 84 nt7.06□□□□□ -1.28
LSM4P40070 MOB1YIL106W 945 nt7.06□□□□□ -1.28
LSM4P40070 HXT13YEL069C 1695 nt7.06□□□□□ -1.28
LSM4P40070 MAS2YHR024C 1449 nt7.05□□□□□ -1.28
LSM4P40070 SPE2YOL052C 1191 nt7.05□□□□□ -1.28
LSM4P40070 BAP3YDR046C 1815 nt7.04□□□□□ -1.28
LSM4P40070 AQR1YNL065W 1761 nt7.04□□□□□ -1.28
LSM4P40070 GDH1YOR375C 1365 nt7.04□□□□□ -1.28
LSM4P40070 SOL2YCR073W-A 948 nt7.03□□□□□ -1.28
LSM4P40070 YPL108WYPL108W 507 nt7.03□□□□□ -1.28
LSM4P40070 TAT2YOL020W 1779 nt7.03□□□□□ -1.28
LSM4P40070 TGA1tA(UGC)A 73 nt7.02□□□□□ -1.29
LSM4P40070 tA(UGC)EtA(UGC)E 73 nt7.02□□□□□ -1.29
LSM4P40070 tA(UGC)GtA(UGC)G 73 nt7.02□□□□□ -1.29
LSM4P40070 tA(UGC)LtA(UGC)L 73 nt7.02□□□□□ -1.29
LSM4P40070 tA(UGC)OtA(UGC)O 73 nt7.02□□□□□ -1.29
LSM4P40070 YDR455CYDR455C 309 nt7.02□□□□□ -1.29
LSM4P40070 KAE1YKR038C 1161 nt7.02□□□□□ -1.29
LSM4P40070 PRE5YMR314W 705 nt7.02□□□□□ -1.29
LSM4P40070 AAT1YKL106W 1356 nt7.02□□□□□ -1.29
LSM4P40070 ERO1YML130C 1692 nt7.02□□□□□ -1.29
LSM4P40070 ASP3-1YLR155C 1089 nt7.01□□□□□ -1.29
LSM4P40070 ASP3-2YLR157C 1089 nt7.01□□□□□ -1.29
LSM4P40070 ASP3-3YLR158C 1089 nt7.01□□□□□ -1.29
LSM4P40070 ASP3-4YLR160C 1089 nt7.01□□□□□ -1.29
LSM4P40070 YDR306CYDR306C 1437 nt7.01□□□□□ -1.29
LSM4P40070 ADE8YDR408C 645 nt7□□□□□ -1.29
LSM4P40070 YBL095WYBL095W 813 nt7□□□□□ -1.29
LSM4P40070 MSB3YNL293W 1902 nt6.99□□□□□ -1.29
LSM4P40070 SDS24YBR214W 1584 nt6.99□□□□□ -1.29
LSM4P40070 YEL034C-AYEL034C-A 603 nt6.98□□□□□ -1.29
LSM4P40070 OPI3YJR073C 621 nt6.98□□□□□ -1.29
LSM4P40070 SDH8YBR269C 417 nt6.98□□□□□ -1.29
LSM4P40070 YER152CYER152C 1332 nt6.98□□□□□ -1.29
LSM4P40070 SNU66YOR308C 1764 nt6.97□□□□□ -1.29
LSM4P40070 POB3YML069W 1659 nt6.97□□□□□ -1.29
LSM4P40070 HXT9YJL219W 1704 nt6.97□□□□□ -1.29
LSM4P40070 ADA2YDR448W 1305 nt6.97□□□□□ -1.29
LSM4P40070 FCY1YPR062W 477 nt6.96□□□□□ -1.3
LSM4P40070 YLR072WYLR072W 2082 nt6.96□□□□□ -1.3
LSM4P40070 YLR280CYLR280C 351 nt6.95□□□□□ -1.3
LSM4P40070 LEA1YPL213W 717 nt6.95□□□□□ -1.3
LSM4P40070 TAD2YJL035C 753 nt6.94□□□□□ -1.3
LSM4P40070 ENO1YGR254W 1314 nt6.94□□□□□ -1.3
LSM4P40070 ENO2YHR174W 1314 nt6.94□□□□□ -1.3
LSM4P40070 VBA3YCL069W 1377 nt6.94□□□□□ -1.3
LSM4P40070 ERG13YML126C 1476 nt6.93□□□□□ -1.3
LSM4P40070 AMF1YOR378W 1548 nt6.93□□□□□ -1.3
LSM4P40070 YKR012CYKR012C 378 nt6.93□□□□□ -1.3
LSM4P40070 YMC2YBR104W 990 nt6.93□□□□□ -1.3
LSM4P40070 FCP1YMR277W 2199 nt6.92□□□□□ -1.3
LSM4P40070 TPC1YGR096W 945 nt6.92□□□□□ -1.3
LSM4P40070 GPM1YKL152C 744 nt6.92□□□□□ -1.3
LSM4P40070 RRT6YGL146C 936 nt6.91□□□□□ -1.3
LSM4P40070 FUS3YBL016W 1062 nt6.91□□□□□ -1.3
LSM4P40070 LEU2YCL018W 1095 nt6.91□□□□□ -1.3
LSM4P40070 YMR265CYMR265C 1386 nt6.91□□□□□ -1.3
LSM4P40070 SAC7YDR389W 1965 nt6.88□□□□□ -1.31
LSM4P40070 CDC13YDL220C 2775 nt6.87□□□□□ -1.31
LSM4P40070 ADE1YAR015W 921 nt6.87□□□□□ -1.31
LSM4P40070 YBL111CYBL111C 2004 nt6.86□□□□□ -1.31
LSM4P40070 ELP4YPL101W 1371 nt6.86□□□□□ -1.31
LSM4P40070 WSC4YHL028W 1818 nt6.86□□□□□ -1.31
LSM4P40070 YER156CYER156C 1017 nt6.86□□□□□ -1.31
LSM4P40070 APT1YML022W 564 nt6.86□□□□□ -1.31
LSM4P40070 PET18YCR020C 648 nt6.85□□□□□ -1.31
LSM4P40070 RPN14YGL004C 1254 nt6.85□□□□□ -1.31
LSM4P40070 RPR1RPR1 369 nt6.85□□□□□ -1.31
LSM4P40070 HAP5YOR358W 729 nt6.85□□□□□ -1.31
LSM4P40070 NAM8YHR086W 1572 nt6.85□□□□□ -1.31
LSM4P40070 YFR020WYFR020W 699 nt6.84□□□□□ -1.31
LSM4P40070 UTR5YEL035C 501 nt6.83□□□□□ -1.32
LSM4P40070 PET494YNR045W 1470 nt6.82□□□□□ -1.32
LSM4P40070 ELO1YJL196C 933 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms