Protein–RNA interactions for Protein: P37292

SHM1, Serine hydroxymethyltransferase, mitochondrial, yeastyeast

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHM1P37292 tD(GUC)J1tD(GUC)J1 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)J2tD(GUC)J2 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)J3tD(GUC)J3 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)J4tD(GUC)J4 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)KtD(GUC)K 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)L1tD(GUC)L1 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)L2tD(GUC)L2 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)MtD(GUC)M 72 nt9.02□□□□□ -0.97
SHM1P37292 tD(GUC)OtD(GUC)O 72 nt9.02□□□□□ -0.97
SHM1P37292 IGD1YFR017C 588 nt9.01□□□□□ -0.97
SHM1P37292 EMC3YKL207W 762 nt9.01□□□□□ -0.97
SHM1P37292 VBA3YCL069W 1377 nt9□□□□□ -0.97
SHM1P37292 SDS24YBR214W 1584 nt9□□□□□ -0.97
SHM1P37292 ATP6Q0085 780 nt9□□□□□ -0.97
SHM1P37292 YNL165WYNL165W 1221 nt9□□□□□ -0.97
SHM1P37292 MPS2YGL075C 1164 nt8.99□□□□□ -0.97
SHM1P37292 SED5YLR026C 1023 nt8.99□□□□□ -0.97
SHM1P37292 UBC12YLR306W 567 nt8.99□□□□□ -0.97
SHM1P37292 ALD5YER073W 1563 nt8.99□□□□□ -0.97
SHM1P37292 tR(UCU)Q1tR(UCU)Q1 73 nt8.98□□□□□ -0.97
SHM1P37292 GAT1YFL021W 1533 nt8.97□□□□□ -0.97
SHM1P37292 RMA1YKL132C 1293 nt8.97□□□□□ -0.97
SHM1P37292 MRS4YKR052C 915 nt8.97□□□□□ -0.97
SHM1P37292 STP3YLR375W 1032 nt8.97□□□□□ -0.97
SHM1P37292 FSH2YMR222C 672 nt8.97□□□□□ -0.97
SHM1P37292 AAC3YBR085W 924 nt8.97□□□□□ -0.97
SHM1P37292 PCL10YGL134W 1302 nt8.97□□□□□ -0.97
SHM1P37292 TPN1YGL186C 1740 nt8.95□□□□□ -0.98
SHM1P37292 snR86snR86 1004 nt8.95□□□□□ -0.98
SHM1P37292 SUA5YGL169W 1281 nt8.95□□□□□ -0.98
SHM1P37292 tS(GCU)LtS(GCU)L 80 nt8.95□□□□□ -0.98
SHM1P37292 MRS3YJL133W 945 nt8.95□□□□□ -0.98
SHM1P37292 TAF4YMR005W 1167 nt8.95□□□□□ -0.98
SHM1P37292 PEX27YOR193W 1131 nt8.95□□□□□ -0.98
SHM1P37292 YBR232CYBR232C 360 nt8.95□□□□□ -0.98
SHM1P37292 SIR2YDL042C 1689 nt8.94□□□□□ -0.98
SHM1P37292 RRP1YDR087C 837 nt8.93□□□□□ -0.98
SHM1P37292 MOB1YIL106W 945 nt8.93□□□□□ -0.98
SHM1P37292 ARC19YKL013C 516 nt8.93□□□□□ -0.98
SHM1P37292 HXK1YFR053C 1458 nt8.93□□□□□ -0.98
SHM1P37292 ABP1YCR088W 1779 nt8.92□□□□□ -0.98
SHM1P37292 MEP1YGR121C 1479 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)DtA(AGC)D 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)FtA(AGC)F 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)GtA(AGC)G 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)HtA(AGC)H 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)JtA(AGC)J 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)K1tA(AGC)K1 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)K2tA(AGC)K2 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)LtA(AGC)L 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)M1tA(AGC)M1 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)M2tA(AGC)M2 73 nt8.92□□□□□ -0.98
SHM1P37292 tA(AGC)PtA(AGC)P 73 nt8.92□□□□□ -0.98
SHM1P37292 YGL188CYGL188C 174 nt8.92□□□□□ -0.98
SHM1P37292 COX3Q0275 810 nt8.92□□□□□ -0.98
SHM1P37292 YPT11YNL304W 1254 nt8.92□□□□□ -0.98
SHM1P37292 MIM1YOL026C 342 nt8.92□□□□□ -0.98
SHM1P37292 YOR072WYOR072W 315 nt8.92□□□□□ -0.98
SHM1P37292 MEX67YPL169C 1800 nt8.91□□□□□ -0.98
SHM1P37292 NDJ1YOL104C 1059 nt8.91□□□□□ -0.98
SHM1P37292 DUR3YHL016C 2208 nt8.9□□□□□ -0.98
SHM1P37292 PAR32YDL173W 888 nt8.9□□□□□ -0.98
SHM1P37292 MMS21YEL019C 804 nt8.9□□□□□ -0.98
SHM1P37292 YOR169CYOR169C 465 nt8.9□□□□□ -0.98
SHM1P37292 HBS1YKR084C 1836 nt8.89□□□□□ -0.99
SHM1P37292 CTR1YPR124W 1221 nt8.89□□□□□ -0.99
SHM1P37292 TMS1YDR105C 1422 nt8.88□□□□□ -0.99
SHM1P37292 FLX1YIL134W 936 nt8.88□□□□□ -0.99
SHM1P37292 PZF1YPR186C 1290 nt8.88□□□□□ -0.99
SHM1P37292 BSP1YPR171W 1731 nt8.88□□□□□ -0.99
SHM1P37292 YFR020WYFR020W 699 nt8.87□□□□□ -0.99
SHM1P37292 YLR311CYLR311C 348 nt8.87□□□□□ -0.99
SHM1P37292 YBR056WYBR056W 1506 nt8.86□□□□□ -0.99
SHM1P37292 YJR149WYJR149W 1215 nt8.86□□□□□ -0.99
SHM1P37292 COA2YPL189C-A 207 nt8.85□□□□□ -0.99
SHM1P37292 IPL1YPL209C 1104 nt8.85□□□□□ -0.99
SHM1P37292 LEA1YPL213W 717 nt8.85□□□□□ -0.99
SHM1P37292 YMR210WYMR210W 1350 nt8.85□□□□□ -0.99
SHM1P37292 ENO1YGR254W 1314 nt8.84□□□□□ -0.99
SHM1P37292 YJL009WYJL009W 327 nt8.83□□□□□ -1
SHM1P37292 MRI1YPR118W 1236 nt8.83□□□□□ -1
SHM1P37292 YDL157CYDL157C 357 nt8.82□□□□□ -1
SHM1P37292 YPR150WYPR150W 522 nt8.82□□□□□ -1
SHM1P37292 AME1YBR211C 975 nt8.82□□□□□ -1
SHM1P37292 LYS20YDL182W 1287 nt8.81□□□□□ -1
SHM1P37292 NEJ1YLR265C 1029 nt8.81□□□□□ -1
SHM1P37292 TIF34YMR146C 1044 nt8.81□□□□□ -1
SHM1P37292 CWC25YNL245C 540 nt8.81□□□□□ -1
SHM1P37292 ORT1YOR130C 879 nt8.81□□□□□ -1
SHM1P37292 snR4snR4 186 nt8.81□□□□□ -1
SHM1P37292 YER147C-AYER147C-A 411 nt8.8□□□□□ -1
SHM1P37292 RSM7YJR113C 744 nt8.8□□□□□ -1
SHM1P37292 RNA170RNA170 169 nt8.8□□□□□ -1
SHM1P37292 DIA1YMR316W 1011 nt8.8□□□□□ -1
SHM1P37292 PRE2YPR103W 864 nt8.8□□□□□ -1
SHM1P37292 ALG7YBR243C 1347 nt8.8□□□□□ -1
SHM1P37292 YNL040WYNL040W 1371 nt8.79□□□□□ -1
SHM1P37292 LYS12YIL094C 1116 nt8.79□□□□□ -1
SHM1P37292 YLR280CYLR280C 351 nt8.79□□□□□ -1
SHM1P37292 YMR074CYMR074C 438 nt8.79□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms