Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 NPP1YCR026C 2229 nt8.74□□□□□ -1.01
SHP1P34223 RPR1RPR1 369 nt8.74□□□□□ -1.01
SHP1P34223 PUP3YER094C 618 nt8.72□□□□□ -1.01
SHP1P34223 HAC1YFL031W 717 nt8.72□□□□□ -1.01
SHP1P34223 THI73YLR004C 1572 nt8.72□□□□□ -1.01
SHP1P34223 JHD1YER051W 1479 nt8.71□□□□□ -1.01
SHP1P34223 YDR467CYDR467C 327 nt8.71□□□□□ -1.02
SHP1P34223 MDM35YKL053C-A 261 nt8.71□□□□□ -1.02
SHP1P34223 BUB2YMR055C 921 nt8.71□□□□□ -1.02
SHP1P34223 PSP2YML017W 1782 nt8.71□□□□□ -1.02
SHP1P34223 GID7YCL039W 2238 nt8.7□□□□□ -1.02
SHP1P34223 YBR056WYBR056W 1506 nt8.7□□□□□ -1.02
SHP1P34223 tE(CUC)DtE(CUC)D 72 nt8.7□□□□□ -1.02
SHP1P34223 tE(CUC)ItE(CUC)I 72 nt8.7□□□□□ -1.02
SHP1P34223 YDR476CYDR476C 675 nt8.7□□□□□ -1.02
SHP1P34223 YHR218WYHR218W 1812 nt8.68□□□□□ -1.02
SHP1P34223 TIM50YPL063W 1431 nt8.68□□□□□ -1.02
SHP1P34223 RIM8YGL045W 1629 nt8.67□□□□□ -1.02
SHP1P34223 YLR358CYLR358C 564 nt8.66□□□□□ -1.02
SHP1P34223 COS10YNR075W 1125 nt8.66□□□□□ -1.02
SHP1P34223 NCA3YJL116C 1014 nt8.65□□□□□ -1.02
SHP1P34223 YBL095WYBL095W 813 nt8.65□□□□□ -1.02
SHP1P34223 MAE1YKL029C 2010 nt8.64□□□□□ -1.03
SHP1P34223 HXT8YJL214W 1710 nt8.64□□□□□ -1.03
SHP1P34223 PMU1YKL128C 888 nt8.64□□□□□ -1.03
SHP1P34223 PUP2YGR253C 783 nt8.62□□□□□ -1.03
SHP1P34223 CPT1YNL130C 1182 nt8.62□□□□□ -1.03
SHP1P34223 MEP1YGR121C 1479 nt8.62□□□□□ -1.03
SHP1P34223 PNS1YOR161C 1620 nt8.62□□□□□ -1.03
SHP1P34223 SPR1YOR190W 1338 nt8.61□□□□□ -1.03
SHP1P34223 MRS4YKR052C 915 nt8.61□□□□□ -1.03
SHP1P34223 FRE6YLL051C 2139 nt8.61□□□□□ -1.03
SHP1P34223 ESBP6YNL125C 2022 nt8.61□□□□□ -1.03
SHP1P34223 LRO1YNR008W 1986 nt8.61□□□□□ -1.03
SHP1P34223 YJL009WYJL009W 327 nt8.6□□□□□ -1.03
SHP1P34223 APT1YML022W 564 nt8.6□□□□□ -1.03
SHP1P34223 YML079WYML079W 606 nt8.6□□□□□ -1.03
SHP1P34223 PRE10YOR362C 867 nt8.6□□□□□ -1.03
SHP1P34223 YMC2YBR104W 990 nt8.59□□□□□ -1.03
SHP1P34223 EHT1YBR177C 1356 nt8.59□□□□□ -1.03
SHP1P34223 NPP2YEL016C 1482 nt8.58□□□□□ -1.04
SHP1P34223 TPN1YGL186C 1740 nt8.58□□□□□ -1.04
SHP1P34223 DOC1YGL240W 753 nt8.58□□□□□ -1.04
SHP1P34223 YHL030W-AYHL030W-A 462 nt8.57□□□□□ -1.04
SHP1P34223 PIH1YHR034C 1035 nt8.57□□□□□ -1.04
SHP1P34223 HXT10YFL011W 1641 nt8.56□□□□□ -1.04
SHP1P34223 YGL114WYGL114W 2178 nt8.55□□□□□ -1.04
SHP1P34223 TPO4YOR273C 1980 nt8.54□□□□□ -1.04
SHP1P34223 snR86snR86 1004 nt8.54□□□□□ -1.04
SHP1P34223 DMA2YNL116W 1569 nt8.53□□□□□ -1.04
SHP1P34223 INH1YDL181W 258 nt8.53□□□□□ -1.04
SHP1P34223 AGP3YFL055W 1677 nt8.53□□□□□ -1.04
SHP1P34223 AAT1YKL106W 1356 nt8.52□□□□□ -1.05
SHP1P34223 CRN1YLR429W 1956 nt8.52□□□□□ -1.05
SHP1P34223 HMG2YLR450W 3138 nt8.52□□□□□ -1.05
SHP1P34223 YMR209CYMR209C 1374 nt8.51□□□□□ -1.05
SHP1P34223 SLM3YDL033C 1254 nt8.5□□□□□ -1.05
SHP1P34223 ATP23YNR020C 813 nt8.5□□□□□ -1.05
SHP1P34223 UME1YPL139C 1383 nt8.49□□□□□ -1.05
SHP1P34223 DIP5YPL265W 1827 nt8.48□□□□□ -1.05
SHP1P34223 YLR072WYLR072W 2082 nt8.48□□□□□ -1.05
SHP1P34223 LAT1YNL071W 1449 nt8.47□□□□□ -1.05
SHP1P34223 YAL019W-AYAL019W-A 570 nt8.47□□□□□ -1.05
SHP1P34223 URA1YKL216W 945 nt8.47□□□□□ -1.05
SHP1P34223 RCF1YML030W 480 nt8.47□□□□□ -1.05
SHP1P34223 ARG7YMR062C 1326 nt8.46□□□□□ -1.06
SHP1P34223 MTO1YGL236C 2010 nt8.45□□□□□ -1.06
SHP1P34223 ADH6YMR318C 1083 nt8.44□□□□□ -1.06
SHP1P34223 URA8YJR103W 1737 nt8.43□□□□□ -1.06
SHP1P34223 CYS3YAL012W 1185 nt8.42□□□□□ -1.06
SHP1P34223 NMA2YGR010W 1188 nt8.41□□□□□ -1.06
SHP1P34223 YJL144WYJL144W 315 nt8.41□□□□□ -1.06
SHP1P34223 YOX1YML027W 1158 nt8.41□□□□□ -1.06
SHP1P34223 BUD31YCR063W 474 nt8.4□□□□□ -1.06
SHP1P34223 ERV2YPR037C 591 nt8.4□□□□□ -1.06
SHP1P34223 YJR142WYJR142W 1029 nt8.39□□□□□ -1.07
SHP1P34223 ALG7YBR243C 1347 nt8.38□□□□□ -1.07
SHP1P34223 ARO3YDR035W 1113 nt8.38□□□□□ -1.07
SHP1P34223 YPQ1YOL092W 927 nt8.38□□□□□ -1.07
SHP1P34223 YBL111CYBL111C 2004 nt8.37□□□□□ -1.07
SHP1P34223 WSC3YOL105C 1671 nt8.37□□□□□ -1.07
SHP1P34223 CPR2YHR057C 618 nt8.37□□□□□ -1.07
SHP1P34223 ABP1YCR088W 1779 nt8.37□□□□□ -1.07
SHP1P34223 FET5YFL041W 1869 nt8.36□□□□□ -1.07
SHP1P34223 INO1YJL153C 1602 nt8.36□□□□□ -1.07
SHP1P34223 MBF1YOR298C-A 456 nt8.36□□□□□ -1.07
SHP1P34223 MSI1YBR195C 1269 nt8.36□□□□□ -1.07
SHP1P34223 STE3YKL178C 1413 nt8.36□□□□□ -1.07
SHP1P34223 TRP2YER090W 1524 nt8.35□□□□□ -1.07
SHP1P34223 RRP43YCR035C 1185 nt8.35□□□□□ -1.07
SHP1P34223 WSC4YHL028W 1818 nt8.35□□□□□ -1.07
SHP1P34223 CKI1YLR133W 1749 nt8.34□□□□□ -1.07
SHP1P34223 THI6YPL214C 1623 nt8.34□□□□□ -1.07
SHP1P34223 PTH2YBL057C 627 nt8.34□□□□□ -1.07
SHP1P34223 HIS3YOR202W 663 nt8.34□□□□□ -1.07
SHP1P34223 ILV2YMR108W 2064 nt8.34□□□□□ -1.07
SHP1P34223 YNL295WYNL295W 1575 nt8.34□□□□□ -1.07
SHP1P34223 TES1YJR019C 1050 nt8.33□□□□□ -1.08
SHP1P34223 PUS4YNL292W 1212 nt8.33□□□□□ -1.08
SHP1P34223 DST1YGL043W 930 nt8.32□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms