Protein–RNA interactions for Protein: P25694

CDC48, Cell division control protein 48, yeastyeast

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC48P25694 MDM35YKL053C-A 261 nt8.86□□□□□ -0.99
CDC48P25694 YLR460CYLR460C 1131 nt8.86□□□□□ -0.99
CDC48P25694 MET22YOL064C 1074 nt8.86□□□□□ -0.99
CDC48P25694 TOM71YHR117W 1920 nt8.86□□□□□ -0.99
CDC48P25694 CHS7YHR142W 951 nt8.83□□□□□ -1
CDC48P25694 RNA170RNA170 169 nt8.83□□□□□ -1
CDC48P25694 PDC6YGR087C 1692 nt8.82□□□□□ -1
CDC48P25694 LPD1YFL018C 1500 nt8.82□□□□□ -1
CDC48P25694 NBA1YOL070C 1506 nt8.82□□□□□ -1
CDC48P25694 EDC2YER035W 438 nt8.82□□□□□ -1
CDC48P25694 MFT1YML062C 1179 nt8.82□□□□□ -1
CDC48P25694 ALR1YOL130W 2580 nt8.82□□□□□ -1
CDC48P25694 UTR5YEL035C 501 nt8.81□□□□□ -1
CDC48P25694 TAD2YJL035C 753 nt8.81□□□□□ -1
CDC48P25694 GPM1YKL152C 744 nt8.81□□□□□ -1
CDC48P25694 REG2YBR050C 1017 nt8.81□□□□□ -1
CDC48P25694 tL(UAA)B1tL(UAA)B1 84 nt8.79□□□□□ -1
CDC48P25694 tL(UAA)B2tL(UAA)B2 84 nt8.79□□□□□ -1
CDC48P25694 tL(UAA)DtL(UAA)D 84 nt8.79□□□□□ -1
CDC48P25694 SUP51tL(UAA)J 84 nt8.79□□□□□ -1
CDC48P25694 tL(UAA)KtL(UAA)K 84 nt8.79□□□□□ -1
CDC48P25694 tL(UAA)LtL(UAA)L 84 nt8.79□□□□□ -1
CDC48P25694 tL(UAA)NtL(UAA)N 84 nt8.79□□□□□ -1
CDC48P25694 UFD1YGR048W 1086 nt8.79□□□□□ -1
CDC48P25694 YOR268CYOR268C 399 nt8.79□□□□□ -1
CDC48P25694 PUS7YOR243C 2031 nt8.78□□□□□ -1
CDC48P25694 YIR035CYIR035C 765 nt8.78□□□□□ -1
CDC48P25694 LEU4YNL104C 1860 nt8.77□□□□□ -1.01
CDC48P25694 ATP2YJR121W 1536 nt8.77□□□□□ -1.01
CDC48P25694 LCP5YER127W 1074 nt8.77□□□□□ -1.01
CDC48P25694 YJR149WYJR149W 1215 nt8.77□□□□□ -1.01
CDC48P25694 BXI1YNL305C 894 nt8.77□□□□□ -1.01
CDC48P25694 AAC3YBR085W 924 nt8.77□□□□□ -1.01
CDC48P25694 AGP3YFL055W 1677 nt8.77□□□□□ -1.01
CDC48P25694 TMS1YDR105C 1422 nt8.77□□□□□ -1.01
CDC48P25694 URH1YDR400W 1023 nt8.76□□□□□ -1.01
CDC48P25694 OLA1YBR025C 1185 nt8.76□□□□□ -1.01
CDC48P25694 FRA1YLL029W 2250 nt8.76□□□□□ -1.01
CDC48P25694 ELP4YPL101W 1371 nt8.75□□□□□ -1.01
CDC48P25694 tE(CUC)DtE(CUC)D 72 nt8.75□□□□□ -1.01
CDC48P25694 tE(CUC)ItE(CUC)I 72 nt8.75□□□□□ -1.01
CDC48P25694 YDR467CYDR467C 327 nt8.74□□□□□ -1.01
CDC48P25694 ARA2YMR041C 1008 nt8.74□□□□□ -1.01
CDC48P25694 RPS6AYPL090C 711 nt8.74□□□□□ -1.01
CDC48P25694 RPS6BYBR181C 711 nt8.74□□□□□ -1.01
CDC48P25694 YLR122CYLR122C 378 nt8.73□□□□□ -1.01
CDC48P25694 FIT1YDR534C 1587 nt8.73□□□□□ -1.01
CDC48P25694 YPR084WYPR084W 1371 nt8.73□□□□□ -1.01
CDC48P25694 GNP1YDR508C 1992 nt8.72□□□□□ -1.01
CDC48P25694 MFG1YDL233W 1377 nt8.72□□□□□ -1.01
CDC48P25694 ADE1YAR015W 921 nt8.71□□□□□ -1.02
CDC48P25694 MIM1YOL026C 342 nt8.7□□□□□ -1.02
CDC48P25694 TOS1YBR162C 1368 nt8.7□□□□□ -1.02
CDC48P25694 tD(GUC)BtD(GUC)B 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)DtD(GUC)D 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)G1tD(GUC)G1 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)G2tD(GUC)G2 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)I1tD(GUC)I1 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)I2tD(GUC)I2 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)J1tD(GUC)J1 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)J2tD(GUC)J2 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)J3tD(GUC)J3 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)J4tD(GUC)J4 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)KtD(GUC)K 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)L1tD(GUC)L1 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)L2tD(GUC)L2 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)MtD(GUC)M 72 nt8.69□□□□□ -1.02
CDC48P25694 tD(GUC)OtD(GUC)O 72 nt8.69□□□□□ -1.02
CDC48P25694 COG1YGL223C 1254 nt8.69□□□□□ -1.02
CDC48P25694 YBL095WYBL095W 813 nt8.69□□□□□ -1.02
CDC48P25694 INH1YDL181W 258 nt8.68□□□□□ -1.02
CDC48P25694 TDH1YJL052W 999 nt8.68□□□□□ -1.02
CDC48P25694 BUB2YMR055C 921 nt8.68□□□□□ -1.02
CDC48P25694 YPL041CYPL041C 624 nt8.68□□□□□ -1.02
CDC48P25694 YBR056WYBR056W 1506 nt8.66□□□□□ -1.02
CDC48P25694 YPT31YER031C 672 nt8.66□□□□□ -1.02
CDC48P25694 FUS3YBL016W 1062 nt8.66□□□□□ -1.02
CDC48P25694 NUP53YMR153W 1428 nt8.65□□□□□ -1.02
CDC48P25694 AI5_BETAQ0075 1065 nt8.65□□□□□ -1.02
CDC48P25694 KAE1YKR038C 1161 nt8.65□□□□□ -1.02
CDC48P25694 YMR206WYMR206W 942 nt8.65□□□□□ -1.02
CDC48P25694 RHO1YPR165W 630 nt8.65□□□□□ -1.02
CDC48P25694 MRS4YKR052C 915 nt8.64□□□□□ -1.03
CDC48P25694 YIL177CYIL177C 5277 nt8.64□□□□□ -1.03
CDC48P25694 HOG1YLR113W 1308 nt8.63□□□□□ -1.03
CDC48P25694 PUP3YER094C 618 nt8.63□□□□□ -1.03
CDC48P25694 FET5YFL041W 1869 nt8.62□□□□□ -1.03
CDC48P25694 HBS1YKR084C 1836 nt8.62□□□□□ -1.03
CDC48P25694 YJL043WYJL043W 774 nt8.62□□□□□ -1.03
CDC48P25694 NSG2YNL156C 900 nt8.62□□□□□ -1.03
CDC48P25694 YMC2YBR104W 990 nt8.62□□□□□ -1.03
CDC48P25694 FTH1YBR207W 1398 nt8.61□□□□□ -1.03
CDC48P25694 NPP2YEL016C 1482 nt8.61□□□□□ -1.03
CDC48P25694 TOM20YGR082W 552 nt8.6□□□□□ -1.03
CDC48P25694 SHC1YER096W 1539 nt8.59□□□□□ -1.03
CDC48P25694 PMU1YKL128C 888 nt8.59□□□□□ -1.03
CDC48P25694 DUS3YLR401C 2007 nt8.59□□□□□ -1.03
CDC48P25694 TIM50YPL063W 1431 nt8.58□□□□□ -1.04
CDC48P25694 YIL168WYIL168W 384 nt8.58□□□□□ -1.04
CDC48P25694 DUR3YHL016C 2208 nt8.58□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 52.4 ms