Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.47■□□□□ 0.71
Gfi1bO70237 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Gfi1bO70237 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1bO70237 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1bO70237 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1bO70237 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1bO70237 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gfi1bO70237 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gfi1bO70237 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.45■□□□□ 0.7
Gfi1bO70237 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.45■□□□□ 0.7
Gfi1bO70237 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gfi1bO70237 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gfi1bO70237 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gfi1bO70237 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1bO70237 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1bO70237 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gfi1bO70237 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1bO70237 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1bO70237 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.43■□□□□ 0.7
Gfi1bO70237 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1bO70237 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.43■□□□□ 0.7
Gfi1bO70237 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gfi1bO70237 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1bO70237 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1bO70237 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1bO70237 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1bO70237 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gfi1bO70237 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Gfi1bO70237 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gfi1bO70237 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1bO70237 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1bO70237 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1bO70237 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gfi1bO70237 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfi1bO70237 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfi1bO70237 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gfi1bO70237 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Gfi1bO70237 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gfi1bO70237 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gfi1bO70237 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1bO70237 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1bO70237 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gfi1bO70237 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Gfi1bO70237 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gfi1bO70237 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Gfi1bO70237 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gfi1bO70237 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.38■□□□□ 0.69
Gfi1bO70237 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfi1bO70237 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Gfi1bO70237 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gfi1bO70237 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gfi1bO70237 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.37■□□□□ 0.69
Gfi1bO70237 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gfi1bO70237 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gfi1bO70237 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.36■□□□□ 0.69
Gfi1bO70237 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Gfi1bO70237 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Gfi1bO70237 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gfi1bO70237 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Gfi1bO70237 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gfi1bO70237 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gfi1bO70237 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gfi1bO70237 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gfi1bO70237 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.32■□□□□ 0.68
Gfi1bO70237 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.32■□□□□ 0.68
Gfi1bO70237 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gfi1bO70237 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfi1bO70237 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfi1bO70237 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.31■□□□□ 0.68
Gfi1bO70237 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gfi1bO70237 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.31■□□□□ 0.68
Gfi1bO70237 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfi1bO70237 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gfi1bO70237 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfi1bO70237 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gfi1bO70237 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gfi1bO70237 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gfi1bO70237 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gfi1bO70237 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gfi1bO70237 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gfi1bO70237 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.28■□□□□ 0.68
Gfi1bO70237 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfi1bO70237 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfi1bO70237 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gfi1bO70237 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gfi1bO70237 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfi1bO70237 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfi1bO70237 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfi1bO70237 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gfi1bO70237 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gfi1bO70237 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gfi1bO70237 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1bO70237 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gfi1bO70237 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1bO70237 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1bO70237 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1bO70237 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1bO70237 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gfi1bO70237 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gfi1bO70237 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms