Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 OLA1YBR025C 1185 nt12.22□□□□□ -0.45
TY1B-HO13535 COQ8YGL119W 1506 nt12.2□□□□□ -0.46
TY1B-HO13535 YBL111CYBL111C 2004 nt12.2□□□□□ -0.46
TY1B-HO13535 PUP3YER094C 618 nt12.2□□□□□ -0.46
TY1B-HO13535 CPT1YNL130C 1182 nt12.18□□□□□ -0.46
TY1B-HO13535 AVO2YMR068W 1281 nt12.18□□□□□ -0.46
TY1B-HO13535 RPD3YNL330C 1302 nt12.14□□□□□ -0.47
TY1B-HO13535 ZIM17YNL310C 525 nt12.14□□□□□ -0.47
TY1B-HO13535 CST26YBR042C 1194 nt12.14□□□□□ -0.47
TY1B-HO13535 MUP1YGR055W 1725 nt12.13□□□□□ -0.47
TY1B-HO13535 MEP1YGR121C 1479 nt12.12□□□□□ -0.47
TY1B-HO13535 JHD1YER051W 1479 nt12.11□□□□□ -0.47
TY1B-HO13535 GGA2YHR108W 1758 nt12.09□□□□□ -0.47
TY1B-HO13535 GAL83YER027C 1254 nt12.08□□□□□ -0.48
TY1B-HO13535 GPM1YKL152C 744 nt12.08□□□□□ -0.48
TY1B-HO13535 ADH6YMR318C 1083 nt12.08□□□□□ -0.48
TY1B-HO13535 MCH5YOR306C 1566 nt12.07□□□□□ -0.48
TY1B-HO13535 YDR510C-AYDR510C-A 117 nt12.07□□□□□ -0.48
TY1B-HO13535 AAC3YBR085W 924 nt12.07□□□□□ -0.48
TY1B-HO13535 SGA1YIL099W 1650 nt12.06□□□□□ -0.48
TY1B-HO13535 RPC31YNL151C 756 nt12.05□□□□□ -0.48
TY1B-HO13535 HXT8YJL214W 1710 nt12.05□□□□□ -0.48
TY1B-HO13535 PMP3YDR276C 168 nt12.04□□□□□ -0.48
TY1B-HO13535 TIM50YPL063W 1431 nt12.04□□□□□ -0.48
TY1B-HO13535 YPQ1YOL092W 927 nt12.02□□□□□ -0.49
TY1B-HO13535 AIM46YHR199C 933 nt12□□□□□ -0.49
TY1B-HO13535 YIR035CYIR035C 765 nt12□□□□□ -0.49
TY1B-HO13535 YJL009WYJL009W 327 nt12□□□□□ -0.49
TY1B-HO13535 TMS1YDR105C 1422 nt11.99□□□□□ -0.49
TY1B-HO13535 PLB3YOL011W 2061 nt11.99□□□□□ -0.49
TY1B-HO13535 TRR2YHR106W 1029 nt11.98□□□□□ -0.49
TY1B-HO13535 PDA1YER178W 1263 nt11.97□□□□□ -0.49
TY1B-HO13535 MBF1YOR298C-A 456 nt11.97□□□□□ -0.49
TY1B-HO13535 CRN1YLR429W 1956 nt11.96□□□□□ -0.49
TY1B-HO13535 ZAP1YJL056C 2643 nt11.96□□□□□ -0.5
TY1B-HO13535 POR2YIL114C 846 nt11.95□□□□□ -0.5
TY1B-HO13535 SPT20YOL148C 1815 nt11.95□□□□□ -0.5
TY1B-HO13535 HOL1YNR055C 1761 nt11.93□□□□□ -0.5
TY1B-HO13535 SSL2YIL143C 2532 nt11.93□□□□□ -0.5
TY1B-HO13535 UGP1YKL035W 1500 nt11.92□□□□□ -0.5
TY1B-HO13535 LDB7YBL006C 543 nt11.92□□□□□ -0.5
TY1B-HO13535 MCP1YOR228C 909 nt11.92□□□□□ -0.5
TY1B-HO13535 PRE10YOR362C 867 nt11.91□□□□□ -0.5
TY1B-HO13535 YDR467CYDR467C 327 nt11.9□□□□□ -0.51
TY1B-HO13535 BUB2YMR055C 921 nt11.9□□□□□ -0.51
TY1B-HO13535 DPL1YDR294C 1770 nt11.89□□□□□ -0.51
TY1B-HO13535 YML034C-AYML034C-A 399 nt11.89□□□□□ -0.51
TY1B-HO13535 BIO3YNR058W 1443 nt11.88□□□□□ -0.51
TY1B-HO13535 CWP2YKL096W-A 279 nt11.87□□□□□ -0.51
TY1B-HO13535 PMU1YKL128C 888 nt11.87□□□□□ -0.51
TY1B-HO13535 YHR218WYHR218W 1812 nt11.87□□□□□ -0.51
TY1B-HO13535 YGL081WYGL081W 963 nt11.87□□□□□ -0.51
TY1B-HO13535 CKI1YLR133W 1749 nt11.87□□□□□ -0.51
TY1B-HO13535 PTH2YBL057C 627 nt11.86□□□□□ -0.51
TY1B-HO13535 YMC2YBR104W 990 nt11.86□□□□□ -0.51
TY1B-HO13535 CDC3YLR314C 1563 nt11.86□□□□□ -0.51
TY1B-HO13535 MPH3YJR160C 1809 nt11.85□□□□□ -0.51
TY1B-HO13535 NMA2YGR010W 1188 nt11.85□□□□□ -0.51
TY1B-HO13535 YBR056WYBR056W 1506 nt11.85□□□□□ -0.51
TY1B-HO13535 YJR142WYJR142W 1029 nt11.84□□□□□ -0.51
TY1B-HO13535 ODC1YPL134C 933 nt11.84□□□□□ -0.51
TY1B-HO13535 ARO3YDR035W 1113 nt11.83□□□□□ -0.52
TY1B-HO13535 AIM20YIL158W 615 nt11.83□□□□□ -0.52
TY1B-HO13535 SPS1YDR523C 1473 nt11.81□□□□□ -0.52
TY1B-HO13535 YER152CYER152C 1332 nt11.81□□□□□ -0.52
TY1B-HO13535 MRS4YKR052C 915 nt11.8□□□□□ -0.52
TY1B-HO13535 LRO1YNR008W 1986 nt11.8□□□□□ -0.52
TY1B-HO13535 PSA1YDL055C 1086 nt11.79□□□□□ -0.52
TY1B-HO13535 YLR184WYLR184W 348 nt11.79□□□□□ -0.52
TY1B-HO13535 ERV2YPR037C 591 nt11.79□□□□□ -0.52
TY1B-HO13535 ARG7YMR062C 1326 nt11.79□□□□□ -0.52
TY1B-HO13535 LEU4YNL104C 1860 nt11.79□□□□□ -0.52
TY1B-HO13535 LGE1YPL055C 999 nt11.79□□□□□ -0.52
TY1B-HO13535 YPL067CYPL067C 597 nt11.79□□□□□ -0.52
TY1B-HO13535 tE(CUC)DtE(CUC)D 72 nt11.77□□□□□ -0.52
TY1B-HO13535 tE(CUC)ItE(CUC)I 72 nt11.77□□□□□ -0.52
TY1B-HO13535 PRS4YBL068W 981 nt11.77□□□□□ -0.52
TY1B-HO13535 ALG7YBR243C 1347 nt11.76□□□□□ -0.53
TY1B-HO13535 CYS4YGR155W 1524 nt11.75□□□□□ -0.53
TY1B-HO13535 OSM1YJR051W 1506 nt11.75□□□□□ -0.53
TY1B-HO13535 snR86snR86 1004 nt11.73□□□□□ -0.53
TY1B-HO13535 TES1YJR019C 1050 nt11.72□□□□□ -0.53
TY1B-HO13535 TPN1YGL186C 1740 nt11.72□□□□□ -0.53
TY1B-HO13535 AAD14YNL331C 1131 nt11.71□□□□□ -0.54
TY1B-HO13535 AAT1YKL106W 1356 nt11.7□□□□□ -0.54
TY1B-HO13535 AGP3YFL055W 1677 nt11.69□□□□□ -0.54
TY1B-HO13535 IMD1YAR073W 1212 nt11.69□□□□□ -0.54
TY1B-HO13535 RCF1YML030W 480 nt11.69□□□□□ -0.54
TY1B-HO13535 MSI1YBR195C 1269 nt11.69□□□□□ -0.54
TY1B-HO13535 BUD31YCR063W 474 nt11.67□□□□□ -0.54
TY1B-HO13535 EHT1YBR177C 1356 nt11.67□□□□□ -0.54
TY1B-HO13535 SUN4YNL066W 1263 nt11.67□□□□□ -0.54
TY1B-HO13535 MDM35YKL053C-A 261 nt11.66□□□□□ -0.54
TY1B-HO13535 MDH1YKL085W 1005 nt11.66□□□□□ -0.54
TY1B-HO13535 YMR074CYMR074C 438 nt11.66□□□□□ -0.54
TY1B-HO13535 ERG10YPL028W 1197 nt11.66□□□□□ -0.54
TY1B-HO13535 DIP5YPL265W 1827 nt11.65□□□□□ -0.54
TY1B-HO13535 STS1YIR011C 960 nt11.64□□□□□ -0.55
TY1B-HO13535 MRPL35YDR322W 1104 nt11.63□□□□□ -0.55
TY1B-HO13535 DPM1YPR183W 804 nt11.63□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms