Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.59■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sirpb1bA0A0A6YXN8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.56■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.54■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sirpb1bA0A0A6YXN8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sirpb1bA0A0A6YXN8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sirpb1bA0A0A6YXN8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sirpb1bA0A0A6YXN8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sirpb1bA0A0A6YXN8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.44■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sirpb1bA0A0A6YXN8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sirpb1bA0A0A6YXN8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.37■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sirpb1bA0A0A6YXN8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms