Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8-1A0A075B641 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8-1A0A075B641 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8-1A0A075B641 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav8-1A0A075B641 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trav8-1A0A075B641 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8-1A0A075B641 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8-1A0A075B641 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8-1A0A075B641 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8-1A0A075B641 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8-1A0A075B641 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8-1A0A075B641 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8-1A0A075B641 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8-1A0A075B641 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8-1A0A075B641 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8-1A0A075B641 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8-1A0A075B641 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8-1A0A075B641 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav8-1A0A075B641 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8-1A0A075B641 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8-1A0A075B641 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8-1A0A075B641 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8-1A0A075B641 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.72■□□□□ 0.27
Trav8-1A0A075B641 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.71■□□□□ 0.27
Trav8-1A0A075B641 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8-1A0A075B641 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav8-1A0A075B641 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav8-1A0A075B641 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav8-1A0A075B641 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav8-1A0A075B641 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav8-1A0A075B641 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8-1A0A075B641 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8-1A0A075B641 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav8-1A0A075B641 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav8-1A0A075B641 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8-1A0A075B641 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav8-1A0A075B641 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.67■□□□□ 0.26
Trav8-1A0A075B641 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8-1A0A075B641 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav8-1A0A075B641 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
Trav8-1A0A075B641 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8-1A0A075B641 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8-1A0A075B641 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8-1A0A075B641 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8-1A0A075B641 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8-1A0A075B641 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav8-1A0A075B641 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8-1A0A075B641 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8-1A0A075B641 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8-1A0A075B641 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Trav8-1A0A075B641 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav8-1A0A075B641 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8-1A0A075B641 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8-1A0A075B641 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8-1A0A075B641 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8-1A0A075B641 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trav8-1A0A075B641 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8-1A0A075B641 Gm27322-201ENSMUST00000184007 104 ntBASIC16.61■□□□□ 0.25
Trav8-1A0A075B641 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav8-1A0A075B641 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav8-1A0A075B641 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8-1A0A075B641 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav8-1A0A075B641 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav8-1A0A075B641 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8-1A0A075B641 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8-1A0A075B641 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8-1A0A075B641 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8-1A0A075B641 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav8-1A0A075B641 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.59■□□□□ 0.25
Trav8-1A0A075B641 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav8-1A0A075B641 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav8-1A0A075B641 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms