Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 OFD1P17-201ENST00000437639 3018 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RNY4P14-201ENST00000363656 96 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RNU6-1090P-201ENST00000364065 94 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 Y_RNA.356-201ENST00000365475 113 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RNU6-297P-201ENST00000384636 107 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 Y_RNA.573-201ENST00000384763 105 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RPS20P15-201ENST00000412792 311 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 USP9YP13-201ENST00000417797 480 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL389915.1-201ENST00000422463 466 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC008753.1-201ENST00000423096 284 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 CXCR2P1-202ENST00000443392 1074 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MTND4P19-201ENST00000446659 478 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC002075.1-201ENST00000457396 676 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC023141.9-201ENST00000458734 412 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 GLRXP3-201ENST00000470810 321 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RPL12P30-201ENST00000488389 499 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MTCYBP43-201ENST00000513621 740 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC010338.1-201ENST00000621823 717 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
ZC3H4Q9UPT8 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.02□□□□□ -1.12
ZC3H4Q9UPT8 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.12
ZC3H4Q9UPT8 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
ZC3H4Q9UPT8 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 TMSB4XP2-201ENST00000335179 210 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 RNU5F-6P-201ENST00000362979 116 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 RNA5SP242-201ENST00000364171 118 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 Y_RNA.295-201ENST00000364918 102 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 RNU4-31P-201ENST00000384211 141 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 RNU6-1263P-201ENST00000384601 106 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 RPL31P1-201ENST00000398116 372 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 RN7SKP232-201ENST00000410170 290 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 FABP7P1-201ENST00000424004 391 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 UBE2FP3-201ENST00000436366 524 ntBASIC8.02□□□□□ -1.13
ZC3H4Q9UPT8 ARPC3P1-201ENST00000437218 533 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms