Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC9.41□□□□□ -0.9
PHF8Q9UPP1 TMCC1P1-201ENST00000518897 1980 ntBASIC9.41□□□□□ -0.9
PHF8Q9UPP1 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC9.41□□□□□ -0.9
PHF8Q9UPP1 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC9.41□□□□□ -0.9
PHF8Q9UPP1 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AL359091.1-201ENST00000449048 1734 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC004014.2-201ENST00000623718 5122 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 Y_RNA.184-201ENST00000363884 108 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RNA5SP433-201ENST00000364491 114 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RNU6-359P-201ENST00000365466 108 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RNU1-39P-201ENST00000383897 165 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RPL7P57-201ENST00000423238 740 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AL121916.1-201ENST00000429405 308 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RPL31P35-201ENST00000431058 377 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AL513175.1-201ENST00000431492 780 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RPL36AP53-201ENST00000432891 316 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC007679.3-201ENST00000434035 414 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 IFNA20P-201ENST00000436840 528 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 CBX1P1-201ENST00000440184 427 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 SNRPBP1-201ENST00000443634 282 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC021220.1-201ENST00000507445 630 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 HMGB1P28-201ENST00000507778 552 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 Y_RNA.672-201ENST00000516289 104 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 OR5B19P-201ENST00000531766 928 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC023050.3-201ENST00000541142 333 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 SNORA16A-202ENST00000628458 135 ntBASIC9.4□□□□□ -0.9
PHF8Q9UPP1 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PHF8Q9UPP1 AP000473.2-201ENST00000602659 1537 ntBASIC9.4□□□□□ -0.91
PHF8Q9UPP1 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PHF8Q9UPP1 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AP003972.1-201ENST00000625192 5446 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 PPIAP24-201ENST00000328558 471 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AC067945.1-201ENST00000342609 618 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 RNA5SP77-201ENST00000365394 120 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 SNORA22B-201ENST00000383876 138 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 MRPL50P2-201ENST00000416821 482 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 RPL18AP17-201ENST00000455326 198 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 Z83838.1-202ENST00000456225 839 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 HSPE1P22-201ENST00000456856 327 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 RNU6-261P-201ENST00000459506 102 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 MTND1P3-201ENST00000484956 952 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 MTCO2P24-201ENST00000515611 426 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 SLC2A13P1-201ENST00000531560 322 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AL078601.3-201ENST00000573303 535 ntBASIC9.39□□□□□ -0.91
PHF8Q9UPP1 AC114477.1-201ENST00000605097 605 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms