Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RNU6-806P-201ENST00000365147 105 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 SNORD50.2-201ENST00000365465 70 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 SNORA51.7-201ENST00000384171 134 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RNU6-532P-201ENST00000384318 107 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 DHFRP6-201ENST00000401776 268 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AC244505.2-201ENST00000435089 759 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AC093166.3-201ENST00000448785 303 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RPS23P9-201ENST00000448848 438 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RPS29P5-201ENST00000452777 171 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 OR7E83P-201ENST00000511021 970 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 HSD3BP3-201ENST00000514706 994 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AC022559.1-201ENST00000520905 205 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AP000907.2-201ENST00000530827 353 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 PHBP2-201ENST00000532859 806 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AL121985.2-201ENST00000621192 555 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 ZNF101P1-201ENST00000435701 1720 ntBASIC7.72□□□□□ -1.17
LHX6Q9UPM6 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LHX6Q9UPM6 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
LHX6Q9UPM6 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RPL24P4-201ENST00000326586 421 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RN7SKP173-201ENST00000362821 315 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 SNORA58.1-201ENST00000364133 136 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 MIR558-201ENST00000384920 94 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 MRPL32P1-201ENST00000406301 247 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RN7SKP146-201ENST00000410242 334 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC023141.10-201ENST00000415634 200 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RPS15AP30-201ENST00000420976 390 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AL589794.1-201ENST00000424971 390 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC096632.1-201ENST00000427395 310 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RPS10P14-201ENST00000440748 502 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 NDUFB1P2-201ENST00000449477 176 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AL162388.1-201ENST00000450912 352 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RPL34P22-201ENST00000468193 318 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC090686.1-201ENST00000481577 749 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC090453.1-201ENST00000495560 436 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC026700.1-201ENST00000512074 544 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RNU4-71P-201ENST00000516258 113 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 SCARNA16.2-201ENST00000516520 172 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RNU6-307P-201ENST00000516743 106 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 RNU6-570P-201ENST00000517051 105 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.71□□□□□ -1.18
LHX6Q9UPM6 AC040926.1-201ENST00000530195 238 ntBASIC7.71□□□□□ -1.18
LHX6Q9UPM6 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms