Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SRRM1P2-201ENST00000464531 1192 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 SLC25A51P1-201ENST00000468432 871 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC004825.1-201ENST00000555068 586 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL445222.1-201ENST00000607259 628 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL512329.2-201ENST00000607350 548 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC099842.1-201ENST00000619919 596 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC092656.1-203ENST00000624134 423 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL161756.3-201ENST00000641216 2071 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AL662795.2-201ENST00000624252 3706 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 AC111188.2-201ENST00000529697 1387 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 PRNCR1-201ENST00000635449 12727 ntBASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDLIM7Q9NR12 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RNU6-553P-201ENST00000364047 96 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RNU6-517P-201ENST00000384362 110 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RSL24D1P4-201ENST00000400938 484 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 ERHP2-201ENST00000402323 299 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RN7SKP29-201ENST00000410957 272 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RPL35AP24-201ENST00000413846 330 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 BTF3P9-201ENST00000418784 283 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 MTND4P25-201ENST00000441039 533 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AURKAPS1-201ENST00000451805 1212 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AL645937.3-201ENST00000453647 936 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AL445687.2-201ENST00000458156 728 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RPL38P3-201ENST00000484463 213 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC004453.1-201ENST00000487895 408 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 RN7SL808P-201ENST00000496066 299 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC060788.1-201ENST00000521318 469 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 CBX3P7-201ENST00000532876 502 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 VN1R88P-201ENST00000596787 292 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC106791.2-201ENST00000604680 391 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC015540.1-201ENST00000615828 501 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC005840.5-201ENST00000619166 599 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC018755.4-201ENST00000619715 454 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AL603839.4-201ENST00000624658 1005 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 AC079298.1-201ENST00000625026 1619 ntBASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PDLIM7Q9NR12 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
PDLIM7Q9NR12 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 AC025470.1-201ENST00000510053 2032 ntBASIC6.52□□□□□ -1.37
PDLIM7Q9NR12 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms