Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC021146.5-201ENST00000503544 545 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC093534.1-201ENST00000504977 132 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC020699.1-201ENST00000505161 445 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RN7SKP34-201ENST00000516142 244 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 SNORA19.3-201ENST00000516165 130 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RN7SKP287-201ENST00000516546 266 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 FTH1P11-201ENST00000517577 551 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC020937.1-201ENST00000519677 1013 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC092709.1-201ENST00000521355 1045 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MTND2P38-201ENST00000522536 667 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 DUX4L52-201ENST00000549363 777 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC004825.1-201ENST00000555068 586 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC090888.2-201ENST00000559765 1144 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MIR1269B-201ENST00000580405 75 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AL118522.2-201ENST00000616045 615 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 OR8G7P-201ENST00000616658 848 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC009159.2-201ENST00000617603 606 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 Z99129.2-201ENST00000619967 314 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC068057.2-201ENST00000624047 895 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 SAMMSON-209ENST00000641222 1100 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MTND5P11-201ENST00000511037 1812 ntBASIC5.59□□□□□ -1.51
USP29Q9HBJ7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP29Q9HBJ7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.59□□□□□ -1.52
USP29Q9HBJ7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AL078621.3-201ENST00000623707 2042 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AL672167.2-201ENST00000377164 879 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 RNU6-31P-201ENST00000384388 108 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 RNU6-1005P-201ENST00000384519 107 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 DBIP1-201ENST00000401435 260 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 ZNF602P-201ENST00000405929 924 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 RPL7AP49-201ENST00000429522 581 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AL591438.1-201ENST00000433508 581 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC012075.1-201ENST00000436549 580 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 ARF4P4-201ENST00000439608 520 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 MED6P1-201ENST00000439659 713 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC016772.1-201ENST00000444170 1261 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 MTCYBP11-201ENST00000447254 1109 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 LARP7P4-201ENST00000481075 878 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 PRELID3BP5-201ENST00000508612 460 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 HMGN1P9-201ENST00000515212 298 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 BUD31P1-201ENST00000521828 359 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC012616.1-201ENST00000600294 197 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC099785.1-201ENST00000605697 437 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 AC244107.2-201ENST00000611773 76 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 VN1R9P-201ENST00000614184 867 ntBASIC5.58□□□□□ -1.52
USP29Q9HBJ7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
USP29Q9HBJ7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC083843.2-201ENST00000568248 6253 ntBASIC5.57□□□□□ -1.52
USP29Q9HBJ7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms