Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC021749.1-201ENST00000604322 607 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 VIS1.1-201ENST00000610517 203 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL392048.1-201ENST00000613946 534 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC098679.4-201ENST00000624241 654 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 AC021755.1-201ENST00000559747 1447 ntBASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
AMBRA1Q9C0C7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 BX005019.1-201ENST00000561881 1810 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AP004607.3-201ENST00000530354 3915 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 MFSD8-219ENST00000641228 2559 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC007938.2-201ENST00000604666 2634 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RNU1-87P-201ENST00000363727 170 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RNU6-549P-201ENST00000384433 107 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RNU6-83P-201ENST00000384568 112 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 ERHP2-201ENST00000402323 299 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AL590084.1-201ENST00000407885 387 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RNU4-72P-201ENST00000410754 173 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 GPS2P1-201ENST00000411761 986 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RAP1BP1-201ENST00000412709 553 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AL390023.1-201ENST00000428836 262 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 THAP5P1-201ENST00000439089 262 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AL445466.1-201ENST00000448432 357 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RNU1-88P-201ENST00000459274 128 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RN7SL269P-201ENST00000467795 305 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 MTCO3P15-201ENST00000526563 574 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AP003461.1-201ENST00000528866 78 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 CYP2C60P-201ENST00000566088 139 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC022662.1-201ENST00000580252 331 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AP001269.3-201ENST00000588718 329 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC068768.2-201ENST00000602352 343 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RNU6-84P-201ENST00000607737 102 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AP000255.1-201ENST00000610276 676 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AL021918.2-201ENST00000613415 194 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC067852.7-201ENST00000623270 535 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC104446.1-201ENST00000613728 1321 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 AC111188.2-201ENST00000529697 1387 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 VN2R3P-201ENST00000422626 1412 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RBPJP7-201ENST00000442803 1447 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 RBPJP5-201ENST00000449433 1447 ntBASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.39□□□□□ -1.55
AMBRA1Q9C0C7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MTND5P23-201ENST00000430812 1655 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 241.8 ms