Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.27□□□□□ -1.24
TRAIPQ9BWF2 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TRAIPQ9BWF2 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TRAIPQ9BWF2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TRAIPQ9BWF2 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TRAIPQ9BWF2 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.27□□□□□ -1.24
TRAIPQ9BWF2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AL596244.1-201ENST00000567068 3779 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC079753.1-201ENST00000623243 3868 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RNU4-21P-201ENST00000362802 126 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RNU6-441P-201ENST00000384545 106 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RNY3P10-201ENST00000384764 102 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RN7SKP129-201ENST00000410288 299 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RN7SKP86-201ENST00000410454 332 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AL133384.1-201ENST00000412744 351 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 FMO7P-201ENST00000436045 768 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 TRIM60P16-201ENST00000444048 694 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC002553.2-201ENST00000453217 340 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC097493.1-201ENST00000463958 372 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RPL30P11-201ENST00000495304 339 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC023818.1-201ENST00000498379 384 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC114981.1-201ENST00000503897 678 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC093816.1-201ENST00000515076 913 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 NPM1P6-201ENST00000521088 871 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC060788.1-201ENST00000521318 469 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC008127.2-201ENST00000549925 1075 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 CYCSP2-201ENST00000558168 301 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RN7SL230P-201ENST00000580835 303 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC015818.6-201ENST00000584274 634 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC012368.3-201ENST00000604190 219 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AL589743.6-201ENST00000611025 117 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC008121.2-201ENST00000614647 523 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 uc_338.29-201ENST00000615099 168 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AP001005.3-201ENST00000622049 129 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC025048.6-202ENST00000627667 438 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 HDAC1P2-201ENST00000453661 1398 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AC097063.1-201ENST00000426714 1797 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 RACGAP1P-201ENST00000550663 1879 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AL445437.1-201ENST00000623157 3087 ntBASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.27□□□□□ -1.25
TRAIPQ9BWF2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 PARP4P2-201ENST00000446672 3326 ntBASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 PHKBP1-201ENST00000450951 1951 ntBASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 SNX18P3-202ENST00000565670 1750 ntBASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 SNORA38B-201ENST00000363524 131 ntBASIC7.26□□□□□ -1.25
TRAIPQ9BWF2 RNU4-2-201ENST00000365668 141 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms