Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PKP4Q99569 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 AC023421.1-201ENST00000590535 1785 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 RNU6-225P-201ENST00000384613 103 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 SNORA48.4-201ENST00000391089 134 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 VDAC2P1-201ENST00000399358 958 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 GSTA12P-201ENST00000402398 508 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC093655.2-201ENST00000425735 631 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 MRPS33P4-201ENST00000434892 317 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 CLUHP1-201ENST00000435012 1190 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.12□□□□□ -1.59
PKP4Q99569 CACYBPP1-201ENST00000438592 684 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.12□□□□□ -1.59
PKP4Q99569 CASP3P1-201ENST00000446037 609 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.12□□□□□ -1.59
PKP4Q99569 DNAJB5P1-201ENST00000454004 806 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC108161.1-201ENST00000461060 402 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 RPL5P13-201ENST00000462840 709 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 OR2AO1P-201ENST00000476497 403 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 RPL7P39-201ENST00000481157 744 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC015864.1-201ENST00000496512 544 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 RPS4XP20-201ENST00000505751 772 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC113192.3-201ENST00000529152 742 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 AL049779.2-201ENST00000553847 315 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC127381.1-201ENST00000555979 939 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 MIR3176-201ENST00000582210 90 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC069307.1-201ENST00000602820 447 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 IMMP1LP3-201ENST00000604197 224 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC073111.2-201ENST00000605657 1075 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC022467.1-201ENST00000614738 749 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.12□□□□□ -1.59
PKP4Q99569 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.12□□□□□ -1.59
PKP4Q99569 AP000943.4-201ENST00000622912 357 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 OR6C71P-202ENST00000641886 1107 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKP4Q99569 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PKP4Q99569 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKP4Q99569 CASC19-261ENST00000641853 1638 ntBASIC5.12□□□□□ -1.59
PKP4Q99569 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.11□□□□□ -1.59
PKP4Q99569 AC092747.4-201ENST00000620519 1861 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PKP4Q99569 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 RNU4-39P-201ENST00000362455 127 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 NPM1P40-201ENST00000412758 733 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 HYALP1-201ENST00000417674 1279 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC108075.1-201ENST00000424692 529 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.11□□□□□ -1.59
PKP4Q99569 RNF19BPX-201ENST00000426224 625 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.11□□□□□ -1.59
PKP4Q99569 RPL5P25-201ENST00000441148 775 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 RPL10P17-201ENST00000453852 316 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.11□□□□□ -1.59
PKP4Q99569 RN7SL814P-201ENST00000487715 300 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.11□□□□□ -1.59
PKP4Q99569 AC024558.1-201ENST00000505008 528 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC021146.7-201ENST00000509604 775 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 AP001372.4-201ENST00000524889 472 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.11□□□□□ -1.59
PKP4Q99569 AC027176.2-201ENST00000559166 746 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.11□□□□□ -1.59
PKP4Q99569 MIR4489-201ENST00000578869 62 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms